Mesorhizobium sp. AaZ16: ACG873_28790
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Entry
ACG873_28790 CDS
T10854
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meaa Mesorhizobium sp. AaZ16
Pathway
meaa03420
Nucleotide excision repair
meaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACG873_28790
03430 Mismatch repair
ACG873_28790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meaa03400
]
ACG873_28790
Enzymes [BR:
meaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACG873_28790
DNA repair and recombination proteins [BR:
meaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACG873_28790
MMR (mismatch excision repair)
Other MMR factors
ACG873_28790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
RecR_HhH
FdhD-NarQ
HHH
Motif
Other DBs
NCBI-ProteinID:
XIK05514
LinkDB
All DBs
Position
complement(5397046..5399115)
Genome browser
AA seq
689 aa
AA seq
DB search
MSVAYLEKLNPEQRRAVEHGVGISDGRIGGPLLIIAGAGSGKTNTLAHRVGHLIVNGADP
RRILLMTFSRRAASEMARRVERICVQVLGANAGVMTDALAWAGTFHGIGARLLRDYAEQI
GLDPAFTIHDREDSADLMNLARHQLGFSKMESRFPTKGTCLAIYSRAVNSELPIDEVLGS
FFPWCAGWSAQLRELFAAYVEAKQAQNVLDYDDLLLYWAQTVSDPLLADDIGGRFDHVLV
DEYQDTNRLQASILKALKPGGRGMTVVGDDAQSIYSFRAASVRNILDFPTEFSPSAEIIT
LDRNYRSTQPILAAANGVIDLAAERFTKNLWTERQSAERPRLVTVRDETEQARYIVEHVL
ENREVGATLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAMLRFA
QNPRDRVAGFRLMQLLPGVGPTSAQRVLDAMADQPDPLTALANIPVPPRAGDDWTGFVDV
LQQLRPGKAGWPAEIEQARRWYEPHLERIHEDATMRQADLLQLEQIAAGYPSRERFLTEL
TLDPPDATSDQSGVPHLDEDYLILSTIHSAKGQEWKSVFVLNTVDGCIPSDLGVGTTADI
EEERRLLYVAMTRAKDSLHLVTPQRFFTHGQNARGDRHVYASRTRFIPASLLQLFECCTW
PVVTVSQSTRPDARQVRVDVGARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgcctacctcgaaaagctgaatcctgaacagcgccgtgccgtagagcacggc
gtcggcatttccgacggcaggattggcggcccgctgctcatcatcgcaggcgcaggttcg
ggcaagaccaatactctggcgcatcgcgtcgggcatctgatcgtcaacggcgccgatccg
cgccgtatcctgctgatgaccttttcccgcagggcggcaagcgagatggcccgccgcgtc
gaacgcatctgtgtccaggtgctcggcgccaatgccggcgtcatgaccgatgcgctggcc
tgggccggcacttttcacggtatcggcgcgcggctgctgcgagattatgccgagcagatc
gggctcgatcccgccttcaccatccacgaccgggaggacagcgctgacctgatgaacctt
gcacggcaccaactgggcttttccaagatggaaagtcggttcccgaccaaaggcacctgc
cttgcgatctactcccgcgccgtcaattctgaactgccgatcgacgaggtgcttggcagc
ttcttcccatggtgcgccggctggagcgcgcaattgcgtgagttgttcgccgcctacgta
gaggctaaacaggcgcagaacgttctcgattacgacgacctgctgctctactgggcccag
accgtcagcgatccgctccttgccgacgatatcggcggccgtttcgatcatgtcctggtc
gacgaatatcaggacaccaaccgcctccaagcctcgatcctcaaggcgctgaagccgggc
ggccggggaatgaccgtcgtcggtgacgacgcgcagtcgatttattccttccgtgcggcg
tcggttcgcaacatcctcgattttcccaccgagttcagcccgtcggccgaaatcatcacg
ctcgaccgcaattaccgctcgacgcagccaatcctcgccgctgcaaacggcgtcatcgat
cttgcagcagaacggttcacgaaaaatctctggaccgagcgccagtcggcggagcggccg
cggctcgtcaccgttcgcgacgaaaccgaacaggcgcgctacatcgtcgagcacgttctg
gaaaatcgagaggtcggcgccaccctgaagcaacaggcggtgctgttccggacctccagc
cacagcggccctctggaagtcgagctgacgcgccgcaacatccccttcgtcaagttcggc
gggctcaaattcctcgacagcgcacatgtgaaggacatgctggcgatgttgcgctttgca
caaaacccgcgcgatcgcgtcgccggcttccgcctgatgcaactgcttcccggcgtcggc
ccgacatcggcgcaacgtgtgctcgatgccatggccgatcagcccgatccgctgactgcg
cttgccaacattcccgttccgccgcgcgccggcgatgactggacagggtttgtcgatgtg
ctgcagcagctaaggcccggcaaggccggctggccggccgagatagaacaggcccgccgc
tggtatgagccgcatctcgagcgcatccacgaggacgcgacgatgcggcaggccgatctg
ttgcagctcgaacagattgcggcgggctatccgtcgcgggagcgcttcctgaccgaactg
accctcgatccgcccgatgcgacaagcgaccaatcaggcgttccgcatctggacgaggat
tacctgatcctctcgacgatacactccgccaaagggcaggaatggaagtcggtgttcgtc
ctcaacacggtcgacggctgcatcccgtcggacctgggcgtcggcacgacggccgacatc
gaggaggagcgacgcctgctttatgtcgccatgactcgtgcgaaggacagccttcatctc
gtcacgccgcagcgtttcttcacccacggtcagaatgcccggggcgaccggcacgtctat
gcctcgcgtacccgcttcattccggcgagcctgctgcaactgttcgaatgctgcacctgg
ccggttgtcaccgtaagccaaagcacacggcccgatgcgcggcaggtccgcgtcgacgtc
ggcgcgcgcatgcggggcatgtggcgataa
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