Methanonatronarchaeum sp. AMET-Sl: QEN48_00120
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Entry
QEN48_00120 CDS
T09224
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
meae
Methanonatronarchaeum sp. AMET-Sl
Brite
KEGG Orthology (KO) [BR:
meae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meae03016
]
QEN48_00120
Enzymes [BR:
meae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QEN48_00120
Transfer RNA biogenesis [BR:
meae03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QEN48_00120
Prokaryotic type
tRNA splicing ligases
QEN48_00120
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RtcB
TubZ_C
Motif
Other DBs
NCBI-ProteinID:
WGI17446
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All DBs
Position
26245..27681
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AA seq
478 aa
AA seq
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MKREKLTKINDLTWEIPENYKNCMTVPGRMYLSTDLVDIVEEDTYEQVANVACLPGIVKY
SLAMPEAHLGYGFPIGGVAGIDIENGVISPGGVGFDINCGVKTLKTNLELSDVKGGVEEL
INRLFSNIPSGVGSESKLKLSYNDLDYLLENGLDWALENGYANEEDVIYCEEEGRMDSAN
ADKVSKKAKQRGLSQVGTLGSGNHFLEVQYVDEVLDEEAAENFGLEKNQVVVMIHTGSRG
FGHQVCTDYVKKLEKATKKYNIDIPDKQLACAPFDSKEGQDYFSAMACAANYAWVNRQVI
TSWVRDIFKDYYGNDTELNTLYDVAHNMAKKETHNVDGEKKDLIVHRKGATRAFGPNHSD
IPRDYQETGQPVMIPGNMGAPSYILKGTDFAMENTFGSTCHGAGRKMSRSQAKREYWGET
VQKELSKQGIYVKATHGAVIAEESPGAYKNPNKVVNVAHNVGISKKVVKLKPLGVAKG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagaaaaactaactaaaattaatgatttaacttgggaaatcccagaaaactac
aaaaactgtatgaccgttccaggaagaatgtacctatcaacagacctggtcgacatagtt
gaagaagatacttacgaacaagtcgcaaacgttgcatgtctacctggaatagttaaatac
tcactagcaatgcctgaagcccaccttggatatggattcccaataggtggagttgctgga
atcgatatagaaaacggtgtaataagtccaggcggcgtaggcttcgatatcaattgtgga
gtaaagacattaaagactaatctagagttaagtgacgtcaaaggaggggttgaagaacta
ataaatagattgttttcaaacataccctcaggagtcggttcagaaagcaaattaaaattg
agttacaacgaccttgattacctactggaaaatggattggattgggctttagaaaatggt
tatgcaaatgaagaagatgtaatatattgtgaagaagaaggacgtatggatagtgctaac
gctgataaagttagtaaaaaagctaaacaaagaggtctaagtcaggttggaactcttgga
agcggaaaccatttccttgaagtacagtatgtagatgaagtattggatgaagaagctgca
gaaaattttgggctggaaaagaaccaggtagttgtaatgattcatactggaagccgggga
ttcggacatcaagtatgcaccgactatgttaaaaaacttgagaaagctacaaagaaatac
aacatagatattccagataaacagcttgcttgtgctccattcgactcaaaagaagggcaa
gattacttctctgcaatggcttgtgcagcaaattatgcatgggtgaatcgacaagtaata
acaagttgggttagagatatattcaaagattattatggaaacgatacagaactcaacaca
ctttatgatgtcgcccataacatggctaaaaaagagacgcacaatgttgatggagaaaaa
aaagatctaatagttcatcgtaaaggagctacaagggcttttggaccaaaccacagcgat
ataccaagagattaccaagaaactggacaaccagtaatgattcctgggaatatgggtgca
ccttcttacatacttaagggaaccgatttcgctatggaaaacacatttggttcaacctgc
catggtgctggaaggaaaatgagtcgatcacaagctaagagggagtattggggggaaact
gttcaaaaagagctttcaaaacaaggtatatatgtaaaagcaacacatggagcagtaata
gctgaagaatcaccaggagcctataaaaaccctaataaagttgtgaacgtagctcacaac
gtaggtatatctaaaaaagttgttaaattaaagcctcttggagtcgccaaaggataa
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