Methanonatronarchaeum sp. AMET-Sl: QEN48_00540
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Entry
QEN48_00540 CDS
T09224
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
meae
Methanonatronarchaeum sp. AMET-Sl
Pathway
meae04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
meae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
QEN48_00540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meae03019
]
QEN48_00540
03009 Ribosome biogenesis [BR:
meae03009
]
QEN48_00540
04131 Membrane trafficking [BR:
meae04131
]
QEN48_00540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
meae04147
]
QEN48_00540
Messenger RNA biogenesis [BR:
meae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
QEN48_00540
Ribosome biogenesis [BR:
meae03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
QEN48_00540
Membrane trafficking [BR:
meae04131
]
SNARE
SNARE associated proteins
Others
QEN48_00540
Autophagy
Aggrephagy
Other aggrephagy associated proteins
QEN48_00540
Exosome [BR:
meae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QEN48_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_2
TIP49
AAA_22
AAA_33
AAA_14
AAA_5
NPHP3_N
nSTAND3
AAA_lid_PRS2_C
AAA_28
RNA_helicase
IstB_IS21
Mg_chelatase
AAA_18
DUF815
ABC_tran
NB-ARC
AAA_30
AAA_17
AAA_7
SLFN-g3_helicase
AAA_3
Sigma54_activat
Parvo_NS1
Viral_helicase1
TsaE
NACHT
Zeta_toxin
Cytidylate_kin2
AAA_24
Vps4_C
AAA_11
Cytidylate_kin
DUF3929
Motif
Other DBs
NCBI-ProteinID:
WGI17528
LinkDB
All DBs
Position
complement(109682..111898)
Genome browser
AA seq
738 aa
AA seq
DB search
MPDKTIKLRVAEARHRDAGRGIARVSSKVMQNLNLTSGDIIQIEGKGTATAVVWPGYPND
PDNAIRIDGSVRNNAGAGIGDRVEVKKVDAQKAKKITIAPTEEINLRISSDGVRKILEGR
PISKGQKIRVEFFGRAINYKVVQTDPKGTVIADSNTQIEIGDKPVEEVEDVPQVTYEDIG
GLEKELRKVREMIELPMKKPELFQRLGIEPPKGVLLHGPPGTGKTLIAKAVANETDAHFI
SLGGPEIMSKYYGESEKQLRELFEEAKENAPSIIFIDELDSIAPKREEVSGEVERRVVAQ
LLSLMDGLEARGEVVVIATTNQINLIDPALRRPGRFDREIEIGVPDRDGRRQIFEVHTRS
MPLAKDIDLDEFADRTYGFVGADIESLTKESAMNSLRRILPEIDIDAEEIPQEVIDELEV
EKKDFEQAHKEIEPSAMREVFVEIPDITWEDVGGLQEIKNQLREAVEWPMTYPEAFEKID
TAPPRGIVLHGPPGTGKTLLAKAVANESDANFISVKGPELLSKWVGESEKAVRETFRKAK
QSAPTIIFFDEIDSITPRRGGMSGDSQVTERVISQMLTELDGLEERGEVVVIAATNRPDL
IDPALLRQGRLEKHIEVGAPDTEARKEIFKVHTKNKPLAEDVDIEKLAKKTDGYVGSDIE
GLSKEASMMALREKVQQGMTREEAKKAIQDIEINMEHFEKALEKVRSSSDRGEIEQYKKI
SKDFQAKREEKIEEPSII
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataaaactataaaactaagagtagcagaagcgagacaccgagatgccggaaga
ggcatcgcaagagtctcatcgaaagtaatgcaaaacctcaatctaacaagcggagacata
atccaaatcgaaggaaaaggaacagcaaccgcagtagtctggcccggctatccaaacgac
cccgacaacgcaataagaatcgacggaagcgtaagaaacaacgcaggagcaggaatagga
gaccgagtagaagtcaaaaaagtcgacgcccaaaaagccaaaaaaatcaccatcgcccca
accgaagaaataaacctacggatctcatcagacggagtccgcaaaatcctagaaggccgg
ccaatctcaaaaggacagaaaattagagtagagttctttggaagagcaataaactacaaa
gtagtacaaacagacccaaaaggaaccgtgatagctgacagcaacacacagatagaaata
ggagacaaaccagtcgaagaagtcgaagacgtaccacaagtaacatacgaagacatagga
ggcctagaaaaagaactcagaaaagtcagagagatgatagaactcccaatgaaaaaacca
gaactattccaaagactaggaatagaaccaccaaaaggagttctactacacggcccacca
ggaacaggaaaaaccctaatcgcaaaagcagtagcaaacgaaaccgacgcacacttcata
agcctcggcggacccgaaataatgagcaaatactacggagaaagcgaaaaacaactaaga
gaactcttcgaagaagcaaaagaaaacgcaccatcaataatctttatagacgaactcgac
tcaatcgcaccaaaaagagaagaagtaagcggcgaagtagaaagaagagtcgtagcccaa
ctcctatcactaatggacggccttgaagcaagaggagaagtagtcgtaatagccacaaca
aaccaaataaacctaatagaccccgcactaagacgaccaggcagattcgaccgagaaatc
gagatcggagtaccagacagagacggaagaagacaaatattcgaagtacacacacgaagc
atgcccctcgcaaaagacatagacctcgacgaattcgcagacagaacatacggattcgta
ggagccgacatagaatcactaacaaaagaatcagcaatgaactcactacgccgaatacta
ccagaaatcgacatagacgcagaagaaataccacaagaagtaatcgacgaactagaagta
gagaaaaaagacttcgaacaagcacacaaagaaatcgagccctcagcaatgagagaagta
ttcgtagaaataccagacataacatgggaagacgtcggaggcctacaagaaataaaaaac
caactaagagaagcagtagaatggccaatgacatacccagaagcattcgaaaaaatcgac
acagcaccaccaagaggaatcgtactacacggcccaccaggaacaggaaaaacactactc
gcaaaagcagtagccaacgaatcagacgcaaacttcatatcagtcaaaggacccgaacta
ctcagcaaatgggtaggagaatcagaaaaagcagtacgagaaacattcagaaaagcaaaa
caatccgcaccaacaatcatattcttcgacgaaatcgacagcataacaccacgtagagga
ggaatgagcggagacagccaagtcacagaaagagtaataagccaaatgctaaccgaactc
gacggactagaagaaagaggagaagtagtcgtaatagccgcaacaaaccgaccagaccta
atagacccagcactcctaagacaaggaagactagaaaaacacatcgaagtaggagcacca
gacacagaagccagaaaagaaatattcaaagtacacaccaaaaacaaaccactcgcagaa
gacgtagacatagaaaaactagccaaaaaaacagatggatacgtaggatcagacatagaa
ggactaagcaaagaagcatcaatgatggccctaagagaaaaagtccaacaaggaatgaca
agagaagaagccaaaaaagcaatccaagacatagaaataaacatggaacacttcgaaaaa
gcactagaaaaagtcagatcatcaagcgaccgaggcgaaatagaacaatacaaaaaaata
tcaaaagacttccaagcaaaaagagaagaaaaaatagaagaaccaagcataatctaa
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