Methanonatronarchaeum sp. AMET-Sl: QEN48_00550
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Entry
QEN48_00550 CDS
T09224
Name
(GenBank) TFIIB-type zinc ribbon-containing protein
KO
K03124
transcription initiation factor TFIIB
Organism
meae
Methanonatronarchaeum sp. AMET-Sl
Pathway
meae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QEN48_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meae03021
]
QEN48_00550
Transcription machinery [BR:
meae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
QEN48_00550
Prokaryotic type
Archaeal type
TFB
QEN48_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
BRF2-like_C_cyclin_rpt
Cyclin_N
DNA_ligase_ZBD
ORC6_2nd
Cyclin_C
Cas12f1-like_TNB
DZR
Trp_repressor
Zn_ribbon_6
TackOD1
HJURP_C
DUF7575
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
WGI17530
LinkDB
All DBs
Position
complement(112762..113646)
Genome browser
AA seq
294 aa
AA seq
DB search
MNDVERCPECGGKLISEENEVRCESCGLVVDEEMIDSGPDWRAFSFDDEKEKSHVGLPSS
VTKHDKGLSTEIGFKDRYGKELAPEKKAQFSRLRRHQLQSRRSSGKERSLSTGLQEMHRM
VSQLNISKDVHEVAAVFYKTASGKGLMKGRSIEAMVAATLYIASRFYNLPRTLEELSEAA
RVSKKEVARAERYLADELDINLKPASPVDYVPRFVSELDLGKEVENRVVEVIGLADEKGL
LSGRSPVSIAAAATYLVAKVMGKKVTQREISDVSGVSEVTIRNRYHEIEEELDL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgatgttgagagatgtccggagtgtggggggaagcttatttctgaggagaatgag
gttaggtgtgagagttgtggtcttgttgttgatgaggagatgattgattctgggcctgat
tggcgggctttttcttttgatgatgagaaggagaagtctcatgttggtcttccttctagt
gttacgaagcatgataagggtttgagtactgagattggttttaaggataggtatggtaag
gagttggctcctgagaagaaggctcagtttagtaggttgaggcgtcatcagcttcagagt
aggaggtcttcgggtaaggagaggagtctttctactggtcttcaggagatgcataggatg
gttagtcagcttaatatttcgaaggatgttcatgaggttgctgctgttttttataagact
gcttcgggtaaggggttgatgaagggccgtagtattgaggctatggttgctgccactctt
tatattgcttctaggttttataatctccctaggactcttgaggagctttctgaagcggct
cgtgtttctaagaaggaggttgcgcgtgctgagcgttatttggcggatgagcttgatatt
aatttgaagcctgcttctcctgttgattatgttcctaggtttgttagtgagcttgatttg
ggtaaagaggttgagaatcgtgttgttgaggttattgggttggcggatgagaagggtctt
ttgagtgggaggtctcctgttagtattgctgctgccgctacgtatttggtggctaaggtt
atgggtaagaaggttactcagagggagatcagtgatgtttcaggtgttagtgaggttact
attcgaaatcggtatcatgagattgaggaagagctagatctttga
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