Methanonatronarchaeum sp. AMET-Sl: QEN48_00945
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Entry
QEN48_00945 CDS
T09224
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
meae
Methanonatronarchaeum sp. AMET-Sl
Brite
KEGG Orthology (KO) [BR:
meae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meae03032
]
QEN48_00945 (gyrB)
03400 DNA repair and recombination proteins [BR:
meae03400
]
QEN48_00945 (gyrB)
Enzymes [BR:
meae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QEN48_00945 (gyrB)
DNA replication proteins [BR:
meae03032
]
Prokaryotic type
DNA Topoisomerases
QEN48_00945 (gyrB)
DNA repair and recombination proteins [BR:
meae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QEN48_00945 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WGI17606
LinkDB
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Position
complement(198831..200714)
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AA seq
627 aa
AA seq
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MGIEYSSRDIEILEGLKAVRKRPSMYIGSTGPQGLHHLIYEVVDNSIDEAMAGYCDQIDV
TIEDGETVTISDNGRGVPIDKHPELGKSGVEVVMTKLHAGGKFDRKTYKVSGGLHGVGVS
VVNALSKWLEITVKRDGGIYRQRYERGLPATELKKIGDSSETGTKISFKPDPKIFDEIKL
DYNRVLSRMRELAFLNKGLQIDLKDGRNGRTDSFHFEGGIKSFVKKINENKEVLHPEPIY
ITDSSDNVEVEVSLQYTDGYSQNILSFANNINTKDGGTHLSGFKSALTRVINQVGSDKGI
LDDEKLSGQDVREGLTAVVSVRLEEPQFEGQTKTKLGNGEVRGIVRSVLNSGLKEFLMEN
PGVAETVISKSVQAMRARKAAKEARELTRRKSALESTKLPGKLSDCTSRDPELSELFVVE
GDSAGGSAKQARDRRFQAILPLKGKILNVEKARLDRILDNNEIKSLITAIGTGIGDEFNL
ENRRYDKIIIMTDADVDGAHISTLLLTFLYRYMKPLIEEGMVYLARPPLYKITGRGKSKY
VYTEQQKQQALQEINNPGIQRYKGLGEMSPQQLWDTTMNPENRILLQIQNQDDVGADELF
TMLMGEKVEPRRNFIIENASEVTNLDI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggggattgagtatagttctagagatatagagatattggagggcttgaaagcggttcgt
aaacgcccaagcatgtatatagggagtaccgggcctcaaggcctccaccacttaatttac
gaggtagttgacaacagcatagatgaagctatggccggctattgcgaccaaatagacgtc
acaatagaggacggagaaactgtaactataagtgataatggccgtggtgtaccgatcgat
aaacaccccgaacttggtaagagcggggtcgaggtcgttatgaccaaactccacgccgga
ggtaaattcgaccgtaaaacctacaaagtctccggaggtctacacggagtcggtgtctca
gtagtaaacgccctatcaaaatggctagagataaccgttaagagggatggcggtatctac
cgccagcgatacgaacgtggtttaccggccaccgaactaaagaaaattggagattccagt
gagactggaacaaagatctcttttaaacccgaccccaagatatttgatgaaatcaaactg
gattacaaccgcgtactatcccgtatgcgggaactagcattccttaacaaaggcctgcaa
atcgatttaaaggacggtagaaacggccgaaccgattcattccattttgaaggaggcatc
aaatcctttgttaaaaagattaatgagaataaagaggtcttacatccagaaccaatctac
ataaccgattcaagcgataacgtagaggtagaggtctcccttcaatacacagatggatac
agccagaacatactctccttcgcaaacaacataaacacaaaagatggaggaacccaccta
agcggattcaaatctgccttaacccgagtaataaaccaagttggaagcgataaaggcatt
ttagatgatgagaagttatctggtcaggatgtgcgtgaaggcctaacggctgtggtgagt
gtacggcttgaggaaccacagtttgaaggccagaccaaaaccaagttaggtaatggtgag
gtccgggggatagttcgtagtgtcttaaactccggtttaaaggagtttttaatggagaac
ccaggggtggctgaaaccgttatctcgaagtctgttcaagctatgcgggctcgtaaagca
gctaaagaggctcgagaactaacacgccgtaaatcagctttagaaagcactaaactacct
ggaaaactatcagactgcacttccagagacccagagctctccgaactcttcgtagtcgag
ggagattcagccggtggctcagcgaaacaagcaagagaccgacgtttccaagcaatccta
ccactaaaaggaaaaatcctaaatgtagagaaagccaggctagaccgaatactagacaac
aacgaaataaaaagcctgatcacagctataggaaccggaatcggagacgaattcaatcta
gaaaaccggcgttatgacaaaataataataatgacagacgccgacgtagacggagcacac
atctccaccctactactcacattcttatatagatacatgaaacccctaatcgaagaggga
atggtatacctcgcccgaccacccctatacaaaataacaggccgtggaaaaagcaaatac
gtatacacagaacaacaaaaacaacaagccctccaagaaatcaacaaccccggcatacaa
cgatacaaaggcctgggagagatgtcaccacaacaactatgggacaccacaatgaaccca
gaaaaccgaatcctactacaaatacaaaaccaagacgacgtaggagccgacgaactcttc
acaatgctaatgggagaaaaagtagagccaagaagaaacttcataatcgaaaacgcatcc
gaggtcacaaaccttgacatctaa
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