Methanonatronarchaeum sp. AMET-Sl: QEN48_02020
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Entry
QEN48_02020 CDS
T09224
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
meae
Methanonatronarchaeum sp. AMET-Sl
Brite
KEGG Orthology (KO) [BR:
meae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meae03016
]
QEN48_02020 (thpR)
Enzymes [BR:
meae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QEN48_02020 (thpR)
Transfer RNA biogenesis [BR:
meae03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QEN48_02020 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WGI17806
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All DBs
Position
complement(411762..412322)
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AA seq
186 aa
AA seq
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MRSFISLDLPDEFSDEIERIQNELVASGADLNLVDPEKVHITLKFLGEIDSNQLENVFNG
VKKAIGGFDSFKASIETVGVFPDLDYIKVIWLGVDKGSQEVVNLHQRIEQEMVSIGFDEE
EHEFVPHATLARVKSGRNKEQLVETLKKNEGIYVGETTFNSVKIKKSELKPEGPVYTDLK
EVKLGG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgagaagctttatttcacttgacctacctgatgaatttagtgatgagattgagagaatt
caaaatgaattggttgcaagcggggccgacctgaatcttgtagaccctgaaaaggtacat
ataactcttaagtttttaggtgaaatcgattcaaatcaacttgaaaatgtttttaatgga
gttaaaaaagctataggtggttttgatagttttaaagcttcaatagaaacagttggtgtg
tttccagacctcgattacatcaaggtaatctggcttggtgttgataaaggtagtcaggag
gttgttaacctacatcaacgtattgaacaagagatggtttcaattggattcgatgaagaa
gaacatgagtttgttccccatgccacactagctcgagttaaaagtggtcgtaacaaagaa
cagctcgttgaaactttaaaaaagaacgaaggtatttatgtcggcgaaacaacattcaat
tccgtcaagataaagaaaagcgagttaaaaccagaaggacctgtatacaccgatcttaag
gaggtaaagctaggtgggtga
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