Methanonatronarchaeum sp. AMET6-2: MU439_00785
Help
Entry
MU439_00785 CDS
T08077
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
meam
Methanonatronarchaeum sp. AMET6-2
Pathway
meam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MU439_00785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meam03019
]
MU439_00785
Messenger RNA biogenesis [BR:
meam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MU439_00785
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MU439_00785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
ECR1_N_2
OB_RRP5_4th
EXOSC1
HVO_2753_ZBP
S1
Zn_ribbon_NOB1
RRP4_S1
Zn_ribbon_TOP3B
S1_RRP5
HypA
Motif
Other DBs
NCBI-ProteinID:
UOY10204
UniProt:
A0A8T9VSY4
LinkDB
All DBs
Position
144109..144681
Genome browser
AA seq
190 aa
AA seq
DB search
MINDSFTTPGELIGTSEEFTGKEGTYEKNGNVYSSLTGIIHVNEDDRSVWVEPKTSVPPV
PEKGDEIIGRVRDVKDSIVLINIASMVENMDREIAVNEVGAIHVSNVSDDYVKDLSNKFR
SGDIVRAKIIVEKPGAIDLTTNEPQLGVLSAKCSSCNGYLKRKSQKKLVCESCGETETRK
ISSEFGKEMK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgatagttttacaaccccaggcgagttaatcggaacctccgaggagttcact
gggaaagaaggtacatacgaaaagaacggtaatgtatactcctcattgacaggtattata
cacgtcaacgaggatgataggtctgtgtgggttgaaccaaaaacatctgtcccaccagta
ccggagaaaggcgacgagataataggcagggttagagacgtaaaagactcaatagtccta
atcaacatcgcgagcatggttgaaaacatggatcgagagatagctgtgaacgaagttgga
gccatacacgtatcaaacgtcagcgatgactacgttaaagacctatccaacaaatttagg
tcaggagacatagttagggctaaaataatagttgaaaaacccggagctatagacctaaca
acaaacgaaccacagctaggtgtattaagcgcaaaatgcagttcctgcaacggctaccta
aaaaggaaaagccagaaaaaactggtctgcgaaagttgtggagaaaccgaaacccggaaa
atatcatccgagttcggaaaggagatgaaataa
DBGET
integrated database retrieval system
