Methanonatronarchaeum sp. AMET6-2: MU439_02440
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Entry
MU439_02440 CDS
T08077
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
meam
Methanonatronarchaeum sp. AMET6-2
Pathway
meam03022
Basal transcription factors
meam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
meam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MU439_02440
09124 Replication and repair
03420 Nucleotide excision repair
MU439_02440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meam03021
]
MU439_02440
03036 Chromosome and associated proteins [BR:
meam03036
]
MU439_02440
03400 DNA repair and recombination proteins [BR:
meam03400
]
MU439_02440
Enzymes [BR:
meam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MU439_02440
Transcription machinery [BR:
meam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MU439_02440
Chromosome and associated proteins [BR:
meam03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MU439_02440
DNA repair and recombination proteins [BR:
meam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MU439_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Zot
ATPase
nSTAND3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UOY10515
UniProt:
A0A8T9VRW0
LinkDB
All DBs
Position
complement(483580..485673)
Genome browser
AA seq
697 aa
AA seq
DB search
MKSYIDLFPKEQPYESQLDAMEKIDRGVRGGRVVLFEGACGTGKTLASLVPSLYYAKQSG
KKVVIATNVHQQMKQFVDEAKQIYGISNINTVVFKGKKALCIEDMGYGECQALKEETFEL
YRLKKERNELKYEVKGSSDADSRDKKLDLLRKIDEEISEKEANSCVPLLNTLKGEGEFSP
WLFSDVRSPSEVVDWCSVRERCPYEELKKGLEDAELIICNYRHILDPVTLSRFSEWLGEE
GDPFSESILILDEAHNLSSVARDIYSRKIALKTIKKAINEIQDERTRNLVDGDFDKVELL
FKTLVSVIEGLEPEKIWEGHQDVRVQSPDSPRKEDKVSMRMKDEVGDLEGTLNQGLMIGN
ELESIYEEEFKSKKRARKRTCYIQIVSDFLMSYLQNARSPDYYPHLVFKKEGGEVGASLG
LYNCAPENLVGSLISSTHSTIMMSATLRPFSHIRKSFGFKNTLELTYPMSFPIENRQTLA
VDTHALFAKNRDDPAVISELSMVIRDIVESTPGNVLVFFPNWGEAKKYHEAVDVGCDKFL
DMRGESSMEVRDRFFEVGEKGDGAVLFSYIWGTLSEGLDYRDDRVRTVVIVGVPYPLLDD
KMKAIQNSYEKRYGDGWKYGVEVPTVRKVRQALGRAVRSPDDHASRILLDKRYTPSSSRN
MGKYSFYKSLPKELKNEIKEVTPEDVGRAVKEFFLNS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttatattgacctttttcctaaggaacagccttatgaaagtcagttggatgcg
atggagaaaatcgatcgtggcgtacgtggaggccgggttgttcttttcgaaggtgcttgt
ggtactggtaagacacttgcgtcactggttccttcactttattatgctaaacagagtggt
aagaaggttgttatagcaacgaatgttcatcaacagatgaagcagtttgttgatgaagcc
aaacagatatacgggatttctaatataaataccgttgtttttaagggtaagaaagctctc
tgcattgaagatatgggttacggtgagtgtcaggctcttaaagaagaaacttttgagctt
tatcggctaaaaaaagagagaaatgaactaaaatatgaggttaagggttcaagtgacgct
gattctagagataagaaacttgatttgctgagaaaaatcgatgaggagattagtgagaag
gaggcgaatagttgtgttccattactgaacacacttaagggagagggggagttctctccc
tggcttttttctgatgttagaagcccctcagaggttgttgattggtgttctgtccgcgag
agatgtccttatgaagagcttaaaaaaggtcttgaagatgctgagttgattatatgtaat
tacaggcatatactcgaccctgtaacattgtcaaggttttctgaatggcttggtgaggag
ggagatccttttagcgaatctatcttgattcttgatgaggcacataatctcagcagcgtt
gccagagatatatattcgcgtaagattgcgcttaaaacaataaagaaagctataaatgaa
attcaggatgaaagaacccgtaatctggttgacggtgatttcgataaagttgaattgcta
ttcaagacacttgttagtgttattgaggggcttgagccagagaaaatttgggaaggacat
caagatgtaagggttcaatctccagattcacctcgcaaggaagataaagtttctatgcga
atgaaggatgaggttggtgatctagagggcactctaaaccaaggcttgatgattggcaat
gaacttgaatcgatctatgaagaagaatttaagagtaagaagagggcgagaaagcgaacc
tgctatatacagatagttagcgatttcttgatgagttatcttcaaaatgcacggagtcct
gattactatcctcatcttgtttttaagaaagaaggaggagaggttggagcaagccttgga
ttgtataactgtgctccagaaaacctcgtgggctccttaatcagctctactcactccaca
ataatgatgtcggcaactttacggccattcagccatatccgtaagtcctttggatttaaa
aacacgcttgaactaacataccccatgtcatttccgattgaaaaccgacagactcttgct
gtcgatacacacgctctcttcgctaagaatagggatgaccctgcagttatatctgagttg
tctatggttataagggatattgtagagtccacacctggtaacgtcctggttttctttcct
aactggggggaagcaaagaaatatcatgaagcagttgatgtcggttgcgataagtttctt
gatatgcgtggtgagtcctcgatggaagtgagagacaggttttttgaggttggtgaaaag
ggtgatggagctgtcttgttctcatatatctggggtacgttgtctgaaggacttgactat
agagatgacagagttagaaccgtcgttatagttggcgttccatatccattgcttgatgat
aagatgaaggctattcagaattcctacgaaaaaagatatggtgatggctggaagtatggt
gtcgaagttccgactgtcaggaaggttaggcaggctctaggccgtgctgttaggtctcca
gatgaccatgcttccaggattcttctagataaaagatacaccccgagttcaagcagaaat
atgggtaaatattcgttctataagagtcttccaaaagaactgaagaatgaaattaaggaa
gtaactccagaggatgttggtagggcggtaaaagagttcttcttaaactcctaa
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