Methanonatronarchaeum sp. AMET6-2: MU439_02460
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Entry
MU439_02460 CDS
T08077
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
meam
Methanonatronarchaeum sp. AMET6-2
Pathway
meam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MU439_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meam03021
]
MU439_02460
Transcription machinery [BR:
meam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MU439_02460
Prokaryotic type
Archaeal type
TFB
MU439_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4_2
Sigma70_r4
HTH_Mga
HTH_AsnC-type
Trm112p
Zn_ribbon_LysW
Ribosomal_S27e
Cas12f1-like_TNB
WHD_TBPIP
HTH_11
HTH_Tnp_ISL3
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
UOY10519
LinkDB
All DBs
Position
489012..489974
Genome browser
AA seq
320 aa
AA seq
DB search
MSTNSNDKDGERVSIGEYEESGKCPECNAEKLSHDYERAELICEHCGIVIDEEFIDAGPE
WRAFDSEQKEERSRVGSPMTNMTHDKGLSTQISIKNRDGQGNPISSSKKAQFYRLRKWHR
QARISDAKERNLALALGELNRMSSCLNIPRNIQEDSSKIYREAAEADLIKGRSIEGVVAA
SLYIACRKNGVARTLDEIAEAARITRKELGRTYRFISSELELKLPLSLPQEYLPRFCSKL
ELSQKTQLKAEEIIKKAANKGLTSGRSPTGIAAASIYIASVVCGEKRPQKEIAEETNTTE
VTVRNRYQEIKEELGIQINV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacaaattctaatgataaagatggggagagagtttcaattggtgaatacgaagaa
agcggcaaatgtcctgagtgtaatgccgaaaaactttcacatgattatgaaagagccgaa
ttaatttgcgaacactgcgggattgttatagatgaagaatttatagatgctggacccgaa
tggagagcctttgacagcgaacagaaagaagagagaagccgtgttggaagcccaatgaca
aacatgacacatgacaaaggcctttcaacacaaatcagcataaaaaaccgggacggtcaa
ggaaacccaatctcatcaagcaaaaaagcccaattctaccgacttagaaaatggcataga
caagcaagaatatcagacgcaaaagaacgcaacctagcgctagcactgggcgagctaaat
cgaatgtcatcatgcctaaacataccaagaaacatacaggaagactcctcaaaaatctat
agagaagcagctgaagcagacctaataaaaggaagaagtatagaaggagttgttgcagca
tctctttacatagcatgcagaaaaaacggtgtcgccagaaccctagacgaaatagcagaa
gccgccagaataaccagaaaagaactaggcagaacctaccgattcatatcttcagaactt
gaactaaaactacctttatccctaccacaggaatacctacctaggttctgcagcaaacta
gaactctcacagaaaacacaactaaaagcagaagaaatcataaagaaagcagcaaacaaa
ggacttacaagcggcagaagcccaacaggaatagcagcagcatcaatatacatagcaagc
gtagtttgtggagaaaaaagaccacagaaagaaatcgctgaagaaacaaacacaaccgaa
gtaacagtcaggaacaggtaccaggaaatcaaagaagaacttgggatccagataaacgtc
taa
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