Methanonatronarchaeum sp. AMET6-2: MU439_06320
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Entry
MU439_06320 CDS
T08077
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
meam
Methanonatronarchaeum sp. AMET6-2
Pathway
meam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MU439_06320 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meam03021
]
MU439_06320 (tfe)
Transcription machinery [BR:
meam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MU439_06320 (tfe)
Prokaryotic type
Archaeal type
TFE
MU439_06320 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
DUF2250
HVO_2753_ZBP
HTH_9
POLR3C_WHD
Zn_ribbon_Com
zf-Mss51
DUF7560
DUF3577
Sushi_2
DNA_ligase_ZBD
Zn_Ribbon_TF
Tfb5
Motif
Other DBs
NCBI-ProteinID:
UOY09869
UniProt:
A0A8T9VJJ3
LinkDB
All DBs
Position
1191474..1191989
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AA seq
171 aa
AA seq
DB search
MSSSDGNNKLEDPSIRDFIKQVSGEEALQVVRELQERETAVDEELAENVELELNDVRRIL
YQLYQNGLAEYTRSRNSNTGWITYTWRLDLENAENVMEKRKKQIISELEQRLTFEEENVF
YLCPENHVKLTFEEATDINFKCPECGEGLMHDENTEVIEEIKNEIERLKEY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaagttctgatggtaataataaactggaagatccttcaataagggattttattaaa
caggtgtctggtgaagaagctcttcaagtggttcgggaacttcaggaaagagagaccgct
gtagatgaagagttagctgagaatgtggagctagagctcaatgacgttagacgtatactc
tatcagttatatcagaatggcctggcagagtatactagaagtagaaacagcaataccggg
tggataacttatacgtggcgtcttgaccttgaaaacgctgagaacgttatggagaaacgg
aagaaacagattatttcggagctcgagcaacgccttacgtttgaagaggaaaatgttttc
tatctttgtcctgaaaaccacgttaaactgactttcgaggaggctacagacatcaacttc
aagtgtccggagtgtggtgaggggttgatgcacgatgagaacaccgaagttatcgaggag
ataaagaacgagattgagaggttgaaggagtattaa
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integrated database retrieval system