KEGG   Mercurialis annua (annual mercury): 126654540
Entry
126654540         CDS       T10153                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
mean  Mercurialis annua (annual mercury)
Pathway
mean03018  RNA degradation
mean03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mean00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126654540
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126654540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mean03019]
    126654540
   03041 Spliceosome [BR:mean03041]
    126654540
Messenger RNA biogenesis [BR:mean03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126654540
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     126654540
Spliceosome [BR:mean03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    126654540
SSDB
Motif
Pfam: LSM DUF7452
Other DBs
NCBI-GeneID: 126654540
NCBI-ProteinID: XP_050204391
LinkDB
Position
LG7:37599150..37638102
AA seq 87 aa
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITADGR
RVTKLDQILLNGNNIAILVPGGSPDQE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctaacaatccatctcaattactaccttcagagcttatagatcggtgtataggctcc
aaaatatgggtgattatgaagggtgacaaggagctcgttggcactctcagaggatttgat
gtctatgttaacatggtgctcgaagacgtcactgaatatgagataaccgctgatgggcgc
cgtgtaacaaagcttgatcagatactactaaacgggaacaatattgccattctggtccct
ggtggttctcctgatcaagaatga

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