Mercurialis annua (annual mercury): 126654657
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Entry
126654657 CDS
T10153
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126654657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126654657
03012 Translation factors [BR:
mean03012
]
126654657
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126654657
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126654657
Translation factors [BR:
mean03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126654657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
ATPase
nSTAND3
T2SSE
AAA_19
AAA_16
NACHT
Dicer_dimer
ATPase_2
Motif
Other DBs
NCBI-GeneID:
126654657
NCBI-ProteinID:
XP_050204550
LinkDB
All DBs
Position
LG1-X:complement(8535446..8550968)
Genome browser
AA seq
1122 aa
AA seq
DB search
MPNPKLLRSFFLVNYITNNHTKPSTSFFSRRLFSNYAAEQFSDDEYECDFETHKASSSVA
NIDEWKWKLSLLLRSETDQEIVSRDRKDRRDYEQISNLAKRMGLYSEMYGKVVVACKVPL
PNYRPDLDDKRPQREVVIPLSLQRRVESLLQEHLDRARLNCGEVADGAPDATVVDKAEEV
DRDENSESFLDGSVMEKVLQRRSLKMRNMQRAWQESPEGRRLTDFRKSLPAFKERDKLLQ
AIARNQVIVVSGETGCGKTTQLPQFILESEIESGRGAFCSIICTQPRRISAMAVADRVSA
ERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRMLSDRNLSGITHVFVDEIHERGM
NEDFLLIVLKDLLPRRQDLRLILMSATLNAELFSNYFGDAPKIHIPGFTYPVRSHFLEDV
LEMTGYKLTSFNQIDDYGQDKMWKTQRQLAPRKRKNQITTLVEDALNKSSFESYSSKARD
SLACWMPDCIGFNLIEAVLCQICRKERPGAVLVFMTGWEDISCLRDQLKAHPLLGDPNRV
LLLTCHGSMATSEQKLIFERPSSNVRKIVLATNMAEASITINDVVFVVDCGKAKETTYDA
LNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPKCVYEAFAEYQLPELLRTPLNSL
CLQIKSLQVKSIAEFLSAALQPPEPLTVQNAIDFLKMIGALDEKENLTNLGKYLSMLPVD
PKLGKMLIMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKDLAGTAKSRFSAKDYSDHMAL
VRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFNFILKDAGLVDADAGINNKL
SHNQSLVRAIICSGLYPGIASVVHRETSMSFKTMGDGQVLLYANSVNARYPTIPYPWLVF
GEKVKVNTVFIRDSTGVSDSILILFGGALSCGAQAGHLKMLDGYVDFFMDPNLAECYLNL
KEELDKVIQRKLQDPNLDILKEAKYVMLAVQELVSGDQCEGRFVFRRESKKPKESNESRF
SKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERD
AAIEALAWLTHTNDRDDTSHPDVTENMLKLLGKRPRCKRNSG
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatcccaagctattaagaagcttcttcctcgttaattacatcactaacaatcac
acaaaaccctccacttccttcttctctcgccgccttttctccaactacgctgctgagcag
ttctctgacgatgagtatgagtgcgatttcgagacccacaaggcttcttcttccgtggcc
aatattgacgagtggaaatggaagctcagcttgctattgcgcagcgaaactgaccaggaa
attgtgtccagagataggaaggatagaagggattatgagcagatttctaatcttgctaaa
aggatgggactttacagtgaaatgtatggaaaagtggtggttgcttgcaaggttccactt
cctaactacaggccagatttggatgacaagcggcctcaaagagaggtggtcattccgcta
agcttacagaggagggtagagagtttacttcaggaacatcttgacagagctcgacttaat
tgtggagaagttgctgatggtgcacctgatgctacagttgttgataaagctgaagaggtt
gatcgagatgaaaattcagagtctttcttagatggctctgttatggagaaggttcttcag
agaaggagtttgaagatgcgtaatatgcagagagcttggcaggagtctcctgaaggccgg
aggttgacggacttccgcaaatctctaccagcatttaaggaaagggacaaactgctccaa
gcaattgccaggaatcaggttatagtagtatccggggagactggatgtggcaaaacaact
caacttcctcaatttattttggagtcagaaatagaatctgggcgtggggcattctgcagt
attatttgcacacagcctcgaagaatatctgccatggctgttgcagacagggtgtctgca
gagagaggagagcctcttggagaaacggttggatacaaagttcgactggagggtatgaaa
ggaaaaaacacgcatttacttttctgtaccagtggaattttacttagacggatgctaagt
gatagaaacttgagtggtataacccatgtttttgtcgatgaaattcatgagcgaggcatg
aatgaagactttctattgattgtactcaaggatcttcttccacgccgtcaggatttgaga
ctgattctaatgagtgccactttgaatgcggaactgttttccaactattttggcgatgca
ccaaaaattcatattcctggatttacatatccagtgaggtcgcattttttagaagatgtg
ctggaaatgactggttataagttaacatcatttaatcagattgatgattatggacaagac
aaaatgtggaaaacacagaggcagcttgcaccacgaaaaaggaaaaaccagattactact
cttgttgaggatgctctaaataaatcaagttttgagagttatagctccaaggcacgtgat
tcattggcatgctggatgcctgattgcataggatttaaccttattgaggcagttctctgc
caaatatgtaggaaggaacggcctggtgctgtcttggtattcatgactggttgggaggat
attagctgtttgagggatcaacttaaagctcatcctcttttgggagatcctaacagggtt
ctgcttttaacatgtcatggttctatggcaacctctgaacagaaactcatatttgagaga
ccttcttccaatgtacgtaaaatagttcttgccacaaatatggcagaggcaagcatcaca
ataaatgacgtagtctttgtggttgattgtggaaaagcaaaagagaccacttatgatgct
ttgaacaatacaccttgtctgctgccatcatggatatcacaagcctctgctcgacaaaga
agaggcagagctggtcgagtgcagccaggtgaatgttatcatctctaccctaaatgtgta
tatgaagcttttgctgaatatcaactccctgaacttctgagaactcccttgaactctctt
tgcttgcaaataaaaagtttacaggttaaaagtatagcagaattcttgtcagctgctctc
cagccacctgaaccattgacggtccaaaatgccattgattttctgaagatgatcggtgca
ttagatgagaaagaaaatttgactaatcttgggaaatacttatcaatgctaccagtagat
cccaagcttgggaaaatgctaatcatgggtgctatctttcgttgctttgaccctgtattg
acaatagtatctggtctaagtgtccgggatcctttccttcttcctcaagagaaaaaagat
ttggctggaacggcaaagtctagattttctgcaaaggattacagcgatcacatggctctc
gtccgtgcatatgagggatggaaagatgcagaaagagaagggtcagcatatgaatactgc
tggagaaattttctctcagcacaaactcttcaagcaatccattctctaaggaagcagttt
aatttcattttaaaagatgctgggttagtagatgccgatgctggcatcaacaacaaatta
agtcacaaccagtcattggttcgtgcaatcatatgctctggcctctatcccggcatagca
tcagtagtgcaccgagaaacatctatgtctttcaagactatgggtgatggtcaagttcta
ctatacgcgaattctgtgaatgcacgctatccaacgattccttacccatggctggtcttt
ggtgaaaaagtcaaagttaatacagtttttatacgtgattcaactggtgtatctgattca
atactgatccttttcggcggcgctcttagttgtggtgcacaggctgggcatttgaaaatg
ttggacggttatgttgattttttcatggatcctaatttggccgagtgctatttaaaccta
aaagaagaactggataaggtcattcaaaggaagctgcaagatcctaaccttgacattctc
aaggaagccaagtatgtgatgcttgctgttcaagagctggtatcgggggatcaatgcgaa
gggagatttgtgtttagacgtgaaagcaagaagcctaaggagtcgaatgaaagcagattc
agcaaagacggaacaaatccaaaaagcttgctgcaaactcttttgatgagagctggacac
tcccctccaaagtacaaaacaaaacacctcaagacaaatgagtttcgggcattggtcgag
ttcaagggaatgcagtttgtcggtaaacccaagaggaacaaacaattggccgagagagat
gctgcgattgaggcactcgcctggttgactcacaccaatgaccgtgacgacacctcccat
cctgatgtcactgaaaacatgttaaaacttcttggaaaacgtccaagatgtaagcgtaac
agcggttaa
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