Mercurialis annua (annual mercury): 126655194
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Entry
126655194 CDS
T10153
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126655194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
126655194
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126655194
Spliceosome [BR:
mean03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
126655194
Complex C
U4/U6.U5 tri-SnRNP related factors
126655194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_30
AAA_19
nSTAND3
T2SSE
Cas3-like_C_2
Flavi_DEAD
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126655194
NCBI-ProteinID:
XP_050205190
LinkDB
All DBs
Position
LG7:38172172..38196536
Genome browser
AA seq
970 aa
AA seq
DB search
MLARKQTTYAILDADDDDNNNGDATTSGQTSSITVATERRRDESHKKRFRKKIESEEDED
NEVSQVVNERKVKQRISQDEEDGSESEEERLQDQREREQLEQNIRERDAAGTRNLTEPKI
TKKEAEEAVRRSHALEENGIGTLRNVSRQEYLKTREQKKMEELRDDIEDEQYLFNGVKLT
EAEKSALSYKKQMFELVQKSSEDVDDTTVYRMPDAYDDQVRGVNQEKRFGAVHQRYGDGG
SSSKMNPFREQEEWEEYQIGKASLKFGSRNKKQISDDYQFVFEDQIEFIKASVMDGDKFD
GQLPADSLDIAMEKSAMEKIQEDRKSLPIYKFRDDLLAAIEKYQVLVIVGETGSGKTTQI
PQYLHEAGYTKRGKVGCMQPRRVAAMSVSARVSQEMGVKLGHEVGYSIRFEDCTSEKTVL
KYMTDGMLMREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDIARFRPELKLLISSA
TLDAEKFSDYFDGANIFKIPGRRFPVEIHYTKSPEADYLDAAIVTALQIHVTQPPGDVLI
FFTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQSKIFDPTPEGARKVVLA
TNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVTPISKASAMQRAGRSGRTGPGK
CFRLYTAYNFQHDLDDNTVPEIQRTNLANVVLSLKSLGIHDLLNFDFMDPPPSEALLKAL
ELLFALSALNKHGELTKVGRRMADFPLDPMLSKMIVASDKYKCSDEIISIAAMLSIGNSI
FYRPKDKQVHADNARLNFHTGNLGDHIALLKVYSSWKETNYSTQWCYENYIQVRSMKRAR
DIRDQLEGLLERVEIEIASDPNDLDAIKKSITSGFFPHSARLQKNGSYRTVKHPQTVNIH
PSSGLSQVLPRWVIYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVEDPGSKKMPR
GEGHAGQPSI
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaaggaagcagacaacatatgcaatattggatgctgatgatgatgacaacaac
aatggtgatgccactacttctggacagacatcctcaattactgttgccactgaacgtaga
agagatgagtcacataagaagcgatttaggaaaaagattgaaagtgaagaggatgaagac
aatgaggtctcacaagtggtaaatgagagaaaggttaaacagaggatttcccaagatgaa
gaggatggttcagagtcagaggaggaaagattgcaggatcaaagggaaagggaacagtta
gagcaaaatataagagaacgcgatgctgctggaactcgaaatctgacagagccaaagata
acaaagaaggaggcagaagaggcagtgcgaagatcacatgctttggaggaaaatggaatt
ggcactctgagaaacgtgtctaggcaagaatatcttaagacaagagagcaaaaaaaaatg
gaagaactcagggatgatatagaagatgaacaatatctatttaatggtgtaaagcttact
gaagcagaaaaaagtgctctaagttacaagaagcaaatgtttgagcttgtacagaagtcg
tcagaagatgtagatgatactactgtgtatagaatgccagatgcatatgatgatcaagtt
aggggtgttaatcaggagaagagatttggtgcggttcatcagcgttatggagatggtggt
tccagtagcaaaatgaaccccttccgagaacaggaggaatgggaagaatatcagattggg
aaagcttctttgaagtttggctcaaggaacaaaaaacagatctctgatgattatcagttt
gtgtttgaagaccagattgagtttatcaaggcatcagtgatggatggtgacaagtttgat
ggtcaattaccagctgattccctagatattgctatggaaaaatcagctatggagaagatt
caggaggatcgaaaaagtttacctatatacaaattccgagacgatctacttgcggctatt
gagaagtatcaggttcttgttatagtaggagaaaccggttcagggaaaaccacacagata
ccacaatatcttcacgaagctggttacaccaagcgtggaaaggtcggctgtatgcagcca
aggcgggttgcagctatgagtgtttctgccagggtttcccaagaaatgggcgtcaagctt
gggcatgaggttggctactccattcgttttgaagactgcacttcagaaaagactgtattg
aaatacatgaccgatggaatgctcatgcgagaattccttggtgagccggatttggcaagc
tacagtgtagtaatggtggatgaggctcacgagagaactttgtcgaccgacattctgttt
ggactagttaaggatatagcccggtttcgtcctgagttgaagttgctgatctcaagtgca
acgcttgatgctgagaaatttagcgattactttgatggagctaatatttttaaaattcct
ggcaggaggtttcctgttgagatacactacacaaagtcaccagaagctgattatctagac
gcagcaattgtaactgcccttcaaatccatgtgacacagccacctggagatgttttaatt
ttcttcacaggtcaagaggaaatagagacggctgaggagattttgaagcataggacccga
ggtttggggaccaaaattgcagaacttatcatctgccctatatatgcaaatttaccaact
gagcttcagtccaaaatatttgatcctacaccagaaggggcccggaaggttgtccttgca
accaatattgccgaaacatctttaacaattgatgggataaagtatgtcattgatcctggc
ttttgcaagatgaaatcatataaccctaggacagggatggaatctttgttagtaacacct
atttctaaagcttcagcaatgcaacgcgctggccgctctggtcgaacaggtccaggaaag
tgtttccggttgtacactgcctacaatttccaacatgacttggatgacaatacggtaccg
gaaatacaaagaacaaacttagctaatgttgtcctctcattgaagagtcttggaattcac
gacttgctaaattttgattttatggaccccccaccatccgaggcattactaaaagccttg
gaactcttgtttgctctaagtgcactaaataaacatggtgagctgaccaaagttggtaga
agaatggctgactttccactcgatcccatgctatctaaaatgattgttgcttctgacaag
tacaagtgttcagatgagataatttctattgctgcgatgctttctatcggaaattcaata
ttctatcgtccaaaagacaaacaagttcatgctgacaatgccagactgaatttccatact
ggtaacctgggggaccatatagctcttctgaaggtgtatagctcttggaaagaaactaac
tactcaacacaatggtgttacgagaattatattcaggtaaggagtatgaaacgagcaaga
gatataagagatcagttggagggcctactagaaagagttgaaattgagatagcttctgat
cctaatgatttagatgccattaagaagtccattacttctggttttttccctcattctgca
aggctacagaagaatgggtcttacagaacagtgaaacatccccagacagttaatatacat
cctagttctgggctgtctcaggtcctcccgagatgggttatataccatgagttggttctt
acaaccaaggagtacatgaggcaggtaactgagctgaaaccagagtggcttgtagagata
gccccccattattaccagctgaaggatgttgaagatcctgggtcaaagaaaatgccacga
ggggaaggacatgcaggacagccaagtatatga
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integrated database retrieval system
