Mercurialis annua (annual mercury): 126656263
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Entry
126656263 CDS
T10153
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean04120
Ubiquitin mediated proteolysis
mean04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126656263
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
126656263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mean04121
]
126656263
Enzymes [BR:
mean01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126656263
Ubiquitin system [BR:
mean04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126656263
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126656263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
zf-C3HC4_2
Beta-prop_DCAF4
Beta-prop_WDR19_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
zf-C3HC4
Beta-prop_EML
WD40_RFWD3
WD40_like
Beta-prop_CAF1B_HIR1
zf-C3HC4_3
zf-RING_2
Beta-prop_WDR75_1st
zf-C3HC4_4
zf-RING_UBOX
U-box
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
DUF1664
zf-RING_5
DDRGK
zf-Nse
Motif
Other DBs
NCBI-GeneID:
126656263
NCBI-ProteinID:
XP_050206740
LinkDB
All DBs
Position
LG7:complement(43508875..43516346)
Genome browser
AA seq
683 aa
AA seq
DB search
MEEVSTGATVPAVKLEPKPSSSSAAVVAIAAAPASSEHTAEEEAGKSEADKDFLCPICMQ
IIKDAFLTACGHSFCYMCIITHLRNKNDCPCCTQYLTTNQLFPNFLLQKLLKKASARQSS
KNASPVEHFRRVLQQGCEISIKELDSLMSMLSEKKRKMEQEEAERNMQILLDFLQYLRKQ
KVDELNEVRSDLQYIKEDVEAVEKHRMELYRVRDRYSMKLRMLGNDPNMRNLRPSTHEKS
NSGVISSSFSGRGGMTTGNLPTKKMDGKAQGSSHGLQRKDSLTGLDSQFNQSGLSVVRKK
RVHAQFNDLQECYLQKRRQSANQALNQPLDQLERDKSLIQREGYSVGLIDFQSVLSTFTQ
YSRLRVIAELRHGDIFHSANIVSSIEFDRDDELFATAGVSRRIKVFDFSTVLNDPADVHC
PVVEMSTRSKLSCLSWNKFAKNQIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFC
RTEPSVLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSSNHIAVGSADHHIHY
YDLRNISQPLHVFSGHRKAVSYVKFLSNSELASASTDSTLRLWDVKENVPVRTFRGHTNE
KNFVGLSVNREYIACGSETNEVFVYHKEISKPVTWHRFGSPEIDDAEEDAGSYFISAVCW
KSDSPTMLTANSQGTIKVLVLAA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggtatcgactggggcaacagtcccggcggttaagttagagccgaagccatcg
tcctcctccgccgctgtggtggccattgcagcagcaccggcgtcgtccgagcatacagcg
gaggaggaagcaggaaaatcggaggcggataaggattttctatgtccgatatgtatgcaa
atcattaaggatgcgtttttaacagcttgcggacatagtttttgctatatgtgtataatt
actcatctccgtaacaagaatgactgcccttgctgtactcagtatctcactactaatcag
cttttccctaatttcttgctccagaagctattgaagaaagcttctgctcgtcaatcttca
aaaaatgcgtctcctgttgagcattttcgccgtgtattacagcagggttgtgaaatttca
attaaggaactggacagtcttatgtcgatgctatcagagaagaagaggaaaatggaacag
gaagaagctgagagaaatatgcaaatactgctagatttcttacagtatttgcggaagcaa
aaagttgatgaattaaacgaggtacgctctgatctccaatatattaaggaggacgtagag
gcagtagagaaacatagaatggagttataccgcgttagagatagatactctatgaaatta
aggatgcttggaaatgatcccaatatgagaaatctacggccttcaactcacgagaagagt
aatagtggtgtgattagcagttcgtttagtggaagaggagggatgactacagggaatctt
ccaaccaagaaaatggatggtaaggctcaaggaagctctcatgggcttcagagaaaggat
tctttaactgggctagactcacaatttaatcagtcagggctatctgttgtaaggaaaaag
cgagtccatgctcagtttaatgatcttcaagagtgttatctgcaaaagcgtcgtcagtct
gctaatcaggcgcttaatcagccgcttgaccagcttgaaagggataaaagtttaatacaa
agagagggctacagcgtgggccttatagattttcaatctgtcctcagtaccttcactcag
tacagtcggttaagggtcattgctgagctcagacatggggatatcttccactcggccaat
atagtgtcaagcatagaatttgacagggatgatgaattatttgctactgctggagtttcc
aggagaatcaaagttttcgacttctctacagttctcaatgaccctgcggatgtgcattgc
cctgttgtggagatgtcaacacgctctaaacttagctgtttgagttggaacaagtttgcc
aagaatcagatagctagtagtgactatgaaggaattgtaactgtttgggatgtgacaact
aggcagagtgtgatggaatatgaagagcatgaaaaacgtgcatggagtgttgatttctgt
cgcacagaaccctcagtgcttgtatctggcagtgacgattgtaaggtcaaagtttggtgc
acaaatcaggaagctagtgttctcaacattgacatgaaagcgaatatttgttgcgtcaag
tataaccctggatctagcaatcacatagcggttgggtcggcggaccatcatattcattat
tatgacttgagaaacatcagccaaccacttcatgtattcagcgggcacaggaaagctgtt
tcatatgtaaaattcctgtctaacagtgagcttgcttcagcatcaacagacagtacatta
cgattatgggatgtgaaggagaatgtgcctgttcggacattcagaggccacacaaatgag
aaaaattttgtcggtctctcggtaaatcgcgagtacattgcatgtgggagtgaaacaaat
gaagtttttgtctatcacaaggaaatatcgaaacctgttacgtggcatagatttggttca
cctgaaatagatgatgccgaagaggatgcaggatcttacttcataagtgctgtatgctgg
aagagtgacagtcctacgatgttaactgcaaatagccaaggaacaataaaggttttggtt
cttgcagcttaa
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