Mercurialis annua (annual mercury): 126657418
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Entry
126657418 CDS
T10153
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126657418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
126657418
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126657418
Spliceosome [BR:
mean03041
]
Complex A
U2 snRNP components
U2 related factors
126657418
Complex B
126657418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
126657418
NCBI-ProteinID:
XP_050208052
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All DBs
Position
LG7:complement(11497830..11502623)
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AA seq
1188 aa
AA seq
DB search
MEDVKHKLRKGESERKEEESKTIRSHRERDKESNGERHYRKREKGSRRREKGSDYDDDDE
DAGVDDDEYENERQKDKEKQRDRKKEDDERERSKSRKRDREDRGKDRDRDSEERVEKRER
TREKERDKDRGRKERERERERDRERKERDREEREREKERERRDREKEERERERHREREKR
ERDREEREKEKEREREKEKEREKERLIRDKEKRREISSDNNGEDDSREHDRKRRKRDNDD
YRERTRDQSSSRSNRHRDESEVSPRKKTSEDDSDIKEKKTREEELEDEQKKLDDEMEKRR
RRVQEWQELKRKNEEVEKDKHGEASNNDEPHTGKTWTLEGESDDEEAPPTEKLETIMDLD
EIAKPDKEAATSIAVDSNNKMVAIDNGQNDATEDDDIDPLDAFMNNILPEVEKLTNAVIT
QTIDDNKVELKKKNEEGHNGERLKKGSKLKKGSNKSLGRIIPGEDSDSDYGNSENGEDPL
AEEDDEEFIKRVKKTKVEKLSVVDHSKINYEPFRKNFYIEAKEISRMTSEEVATYRKQLE
LKIHGKDVPKPIKTWHQIGLASKILETVKKLNYEKPMPIQTQALPVIMSGRDCIGIAKTG
SGKTLAFVLPMLRHIKDQPPVEAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGIRCVPV
YGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRGVTYLVMDEADRMFDMGF
EPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEV
RPESERFLRLLELLGEWSEKGKILIFVQSQEKCDVLFKDLVKHGYGCLSLHGAKDQSDRE
STISDFKKNVCNLMTATSIAARGLDVKELELVINYDVPNHYEDYVHRVGRTGRAGRKGCA
ITFISEDDARYAPDLVKALELSEQVVPQDLKALADGFMAKVNQGLEQAHGTGYGGSGFKF
NEEEDEKRNAAKRAQAKEYGFEEEKTDSEDEDDGVRKAGGDISRHNNALAQQFVAIASAS
RAATSATPTPIIPGQLLSPSGLPVPLTIPGQAAVVPVINSDNQAKALAAAINLQHNIAKI
QADAMPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAITTRGQFFPPGRIPGSGD
RKLYLFIEGPSETSVKKAKTELKRVLEDITNQALSLPGGAQPGKYSVL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtgaagcataaattgcggaagggggagtcggaaaggaaggaggaggagtcg
aagacgataaggagccatcgtgagcgggataaggagagtaatggcgagaggcattatcgt
aaacgggagaaggggagccgtcgtagagagaaaggtagtgattatgacgatgatgatgaa
gatgccggtgttgatgatgatgagtatgagaacgagagacaaaaggataaagagaagcag
agggatagaaagaaggaggatgatgaaagggaaaggagcaagagtaggaagagagaccgg
gaagataggggtaaagatcgagatagggacagtgaggaaagggtagagaaaagggagaga
acgagagaaaaagaaagagataaagatcgagggaggaaggagcgtgagagggagagagaa
agagacagagagaggaaggagcgtgatagagaagaacgtgagagggagaaagagagggaa
agaagggaccgtgaaaaagaagaacgtgagagggagagacatagagagagggagaaaagg
gaacgtgatagagaagaacgagagaaggaaaaggagcgggaacgagaaaaggaaaaggaa
agagaaaaggagaggcttatcagggacaaggagaagcgtcgagagattagcagcgataat
aatggtgaagatgattctagggagcatgatagaaaacgtcgaaagagagataacgatgac
tacagggagagaactcgtgatcagagcagtagcaggtcaaacaggcatagggatgaaagt
gaggtgagcccgagaaagaagactagtgaggatgactctgatattaaagagaagaaaacc
cgagaggaggaactagaggatgaacagaaaaaattggacgatgaaatggaaaagaggaga
agacgagtacaggagtggcaagagctgaagagaaaaaatgaagaagttgagaaagacaaa
catggggaagcatcaaataatgatgaaccccatacaggtaaaacgtggactcttgaagga
gaatctgatgatgaagaagcaccgcccacagagaaactggagacaatcatggacctggat
gaaatagcaaagccagataaagaagctgcaacttcaattgcggtggattctaataataaa
atggtggctatagacaatggtcagaatgatgctactgaggatgacgatattgatccatta
gatgctttcatgaacaacatcttaccggaagttgagaagctaactaatgctgtgattact
caaacaattgatgataataaagtggagttgaagaagaaaaatgaagaaggacataatggg
gagaggctaaagaaaggctctaagctgaagaaaggctctaataaatcgctggggagaata
attcctggcgaggattctgattcagattatggaaacagtgaaaatggcgaagacccctta
gcagaggaagatgatgaagagttcataaagagggtcaagaagacaaaagttgaaaagctg
tctgttgttgatcactcgaagattaactatgaaccattccgtaaaaatttctatatagaa
gcaaaggagatatcaaggatgacttcggaagaggttgctacttatagaaaacagttagag
ttgaaaatacatggaaaagatgttccaaaacctattaaaacatggcaccaaattggactg
gcaagtaagattttggagacagttaagaagcttaattatgagaagcctatgccaattcaa
actcaggcactgccagtaataatgagtgggagagactgcatagggattgcaaaaactggc
tctggtaaaactctcgcatttgtgcttccaatgctgaggcatatcaaagaccagccacct
gtggaagctggagatgggccgattggacttataatggcaccaacaagagagcttgttcaa
cagatacatagtgacataaagaagtttgccaaggtgctgggaattaggtgtgtacctgtg
tatggaggttctggtgttgctcaacagatcagtgaattgaagcggggaactgaaattgtt
gtctgtaccccaggtaggatgatcgacatactttgcactagtggaggaaaaattacaaat
cttcgaggagtgacatatctggttatggatgaagctgatcgtatgtttgatatgggtttt
gaacctcaaatcaccagaattgtacaaaacattcgaccggatcgtcaaactgtactcttt
tctgcaactttccctcgccaggttgagattttggctcgtaaagtattgaacaagcctgtg
gaaattcaggttggtgggaggagtgttgtgaacaaggacattactcagttggtcgaggtg
aggccagaaagtgaaaggttcttgagactgttagaactacttggtgagtggtctgagaag
ggtaaaattttgatattcgttcagtcgcaggagaagtgcgatgtgttatttaaggatttg
gtgaagcatggctatggatgcctttcccttcatggtgctaaggatcaaagtgaccgcgag
tctaccatttctgacttcaagaagaacgtctgcaatttgatgactgctacaagtattgcg
gccagaggtttagatgtgaaggagcttgaactggtgattaactatgatgttccaaaccac
tacgaggattatgttcatcgtgttggtcgaacaggccgcgctggtcgcaaaggttgtgca
atcacttttatatctgaggacgatgcaagatatgcgccagatcttgtaaaagcattagaa
ctctctgagcaagttgttccacaagacctgaaagctcttgctgatggttttatggcaaaa
gtgaatcaggggcttgagcaagcccatggaaccggttatggtggaagtggttttaaattc
aatgaagaggaggatgaaaagaggaatgcagctaagagagcacaagcaaaggaatatggg
tttgaggaagaaaaaacagattcagaagatgaagatgacggggtgcgtaaggcaggtggt
gacatttcacggcataataatgcccttgcgcagcagtttgttgccattgcttctgcctcc
agagcagctacatctgcaacaccaacccctatcattcctggtcaactgctttctcctagt
ggattacctgttcctctaacaattccggggcaagcagcagttgtgcctgttattaatagt
gataaccaagctaaggcacttgcagctgccatcaacttacagcataacattgcaaagatt
caagctgatgccatgcctgaacattatgaagcagagctcgagattaatgattttccacaa
aatgctcggtggaaggttacccacaaggaaactttgggcccgatttctgactggactggt
gctgccatcactaccagggggcagttcttcccgccaggtcgtattccaggttcaggggat
cggaaactgtacttgttcattgagggccctagtgaaacatctgttaagaaagctaaaaca
gagcttaaacgtgttttggaagacatcacgaaccaggcattatcacttcctggtggagct
caacccggaaaatactccgttttataa
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