Mercurialis annua (annual mercury): 126657472
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Entry
126657472 CDS
T10153
Name
(RefSeq) pre-mRNA-processing factor 39-1 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
mean Mercurialis annua (annual mercury)
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
126657472
Spliceosome [BR:
mean03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
126657472
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_MalT
TPR_12
NRDE-2
TPR_19
Motif
Other DBs
NCBI-GeneID:
126657472
NCBI-ProteinID:
XP_050208119
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Position
LG7:complement(40238093..40248298)
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AA seq
821 aa
AA seq
DB search
MGDSEMVVAETSTVTEYTSAVYTTTTAYGSDTGANVVSDSTVYSTEGTAAFAASTDASYN
MAVYEDSSLAVQGATYETKPGVEAGAASENAEAAGNSSLAPPLSAGYNSSANGNVGSETG
ITPTENGTAANFAGEAAAGQQFAHESEAPMSAEEERLWSIVKANSLDFDAWTALIDETEK
MAGDKILKIRKVYDAFLAEFPLCYGYWKKYADHEARVGSMDKVVEVYERAVLGVTYSVDI
WLHYCIFTISTYEDPDTIRRLFERGLAYVGTDYLSCPLWDKYIEYEEARGEWSHVATIYT
RILEIPNKRLDDYFNRFKDFAASHTLSELRTTEEAAVVAVPAASGGGNQENEGEVYHASE
QSSEPVVSGLTEAEELEKYIASREEIYKKAKEFDSKICDFENAIRRPYFHVRPLNVAELE
NWHNYLDFIEREDLDKVVKLYERCLIACANYPEYWVRYVLCMEVCGSMDLANNALARSTQ
VFVKRQPEIHLFAARFREQNGDIPGARAAYQLLHTETAPGLLEAVVKHANMEYRLGNLND
ACSLYEQATAIEKGKEHSQVLPMLYAQYSRFLYLVSGNLDKAREILVEALENVQLSKPLL
EAFIHLESIQSQPKRIDYLDSLVEKFIASNTDSFASAADREELSCIFLEFLGMFGDAQSI
KKADDRHAKLFLPHRSKSELKKRHAEDYLTSDKTKLAKPYGDDSSPAQSLIGAYPPSAQN
QWAAGYGVQSQAWPPATQGQQWTPGYGQQQQAAYGGYANSYTTPQVPTSAAQTATYGAYP
PTYPTQQAFPQQSYAQPAATAALAPAQQPAAVPQPYCGSYY
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagtgagatggtagtggctgaaacatctacagtcacagaatacacgtcagct
gtatatactactacaactgcttacggtagtgatactggtgcgaacgttgtttctgattct
actgtttattccactgagggtactgcagcctttgctgcttctactgatgcatcatataat
atggcagtgtatgaagattctagtttggctgtacaaggggctacatatgagactaagcca
ggtgttgaagcaggagctgctagtgagaatgcagaagctgctgggaattcatctttggcg
ccaccactgtctgctggttacaattcttctgcaaatggaaatgtcggtagtgaaacagga
ataacaccgactgagaatggtactgctgctaattttgctggagaagctgctgctgggcaa
cagtttgcgcatgaatcagaggcaccaatgtcagctgaagaagagcgattgtggagtatt
gtcaaggctaattccttggactttgatgcatggactgccttgatcgatgaaacagagaag
atggcaggggacaaaatattgaaaattcgaaaagtatatgatgcttttttggctgaattc
ccattgtgttatggttattggaagaagtatgcagatcatgaggcacgtgttggttcaatg
gacaaagtagtggaggtatatgaacgggcagttctgggggtgacatattcagtggacata
tggttgcattattgcatattcaccataagcacatatgaagatccagacaccatcagaagg
ctttttgagagaggattagcatatgttggaacagattatttgtcatgccctctctgggac
aagtacatagaatatgaagaagcgcgtggagaatggagccatgtcgccacaatttacacg
aggatattagagattcccaataagcggttggatgattatttcaataggtttaaggatttt
gccgcaagtcacactttgtcagaattaagaacaaccgaggaagctgctgttgtcgcggtg
cctgctgcttcagggggcggtaaccaagaaaatgagggagaagtttatcatgctagtgaa
caatcttctgaacctgtagtttctggattaacagaagcagaagagttggagaagtacatt
gccagtagagaagagatatataagaaagctaaagagtttgattcaaagatatgtgatttt
gaaaatgctattaggaggccctactttcatgtgcggcctctcaatgttgccgagcttgaa
aattggcacaactatttggattttatagaaagagaagatttggacaaggtggtcaagtta
tatgaacgatgcctaattgcttgtgccaattatcccgagtattgggtacggtatgtctta
tgcatggaagtttgtgggagcatggatcttgctaacaatgcacttgctcgttcaactcag
gtatttgtcaagagacagccagagattcacctttttgctgcccgttttagagagcagaat
ggagacataccaggtgcccgagctgcataccaacttttacacactgaaactgcacctggt
cttcttgaagcagttgttaagcatgcaaacatggaatataggctgggaaacctcaatgat
gcttgctctttatatgagcaggccacagctatcgaaaaaggaaaagagcattctcaggtg
ttaccaatgctatatgcacaatattcccgatttttgtatttggtttctggcaatttggat
aaggctagagaaattctagttgaagcacttgagaatgtccaattatcaaaaccacttctt
gaggccttcatacatcttgaatcaattcagtcacaaccaaagcgaattgattatttagat
tctttagtggagaagttcatcgcatccaacacagatagctttgcaagtgctgctgataga
gaagaactatcctgcattttcttagagtttttgggtatgtttggggatgcacaatctatt
aagaaggccgatgatcggcatgcaaagctctttctacctcatagaagcaagtcagagtta
aagaagcgccatgcagaggattacctaacttcagataagacaaaattagcaaaaccttat
ggtgatgatagttcacctgcacagtcccttattggtgcttatcctccaagtgcacaaaat
cagtgggcagcaggttatggtgtgcagtctcaagcttggccaccagctacacaaggacaa
cagtggactcctggctatggccaacaacagcaggctgcatatggtggttatgcaaacagc
tatactactccacaagtgcccacttctgctgcacaaacagctacatatggtgcttatcct
ccaacctatcctacccagcaggctttccctcaacaaagttatgcacaacctgctgcaaca
gcggcattggctccagcacagcagccagctgctgttcctcagccctattgtgggagttac
tactag
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