Mercurialis annua (annual mercury): 126660430
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Entry
126660430 CDS
T10153
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126660430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mean03021
]
126660430
03041 Spliceosome [BR:
mean03041
]
126660430
03036 Chromosome and associated proteins [BR:
mean03036
]
126660430
Transcription machinery [BR:
mean03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126660430
Spliceosome [BR:
mean03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126660430
Complex B
126660430
Complex C
U2 SnRNP specific factors
126660430
Chromosome and associated proteins [BR:
mean03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
126660430
TFTC complex
126660430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
126660430
NCBI-ProteinID:
XP_050209896
LinkDB
All DBs
Position
LG8:complement(38041160..38046740)
Genome browser
AA seq
1215 aa
AA seq
DB search
MYLYNLTLQRATGVVTAINGNFSGGKTQEIVVARGKVLDLLRPDENSGKLQTVLSVEIFG
AIRSLAQFRLTGAQKDYIVVGSDSGRIVIFEYNKERNVFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNP
IFAAIELEYAEADQDSTGQAASEAQKVLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPG
GGDGPSGVLVCAENFVIYKNEGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTMFFFLL
QTEYGDIFKVTLDHENDKVRELKIKYFDTIPVTASMCVMKLGFLFAASEFGNHALYQFRA
IGEEADVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVANVFDEETA
QIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA
TLVLSIGETVEEVNNSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGK
RTIVKVGSNRVQVVIALSGGELIYFEVDITGQLMEVEKYEMNGDVACLDIAPVPEGRQRS
RFLAVGSFDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGREDSADHPASLF
LNAGLQSGVLFRTLVDMVTGQLSDSRSRFLGLRAPKLFSIIVRGRRAMLCLSSRPWLGYI
HQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYT
PRKFVLQPKKKLLVIVESDQGAYTAEEREAAKKECFEAAGIGENGSANAEQMENGGDDED
KDDPLSDEQYGYPKAESDKWVSCIRVLDPRTATTTCLLELQDNEAAFSLCTVNFHDKEHG
TLLAVGTAKGLQFLPKRSLVAGFIHIYKFVDDGRTLELLHKTQVEGVPLALAQFQGRLLA
GIGPALRLYDLGKKRLLRKCENKLFPNSIVSIQTYRDRIYVGDIQESFHFCKYRRDENQL
YIFADDCVPRWLTASHHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGK
LNGAPNKMEEIVQFHVGDVVTSLSKASLIPGGGECIIYGTVMGSVGSLLPFTSRDDVDFF
SHLEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRTP
GEILKKLEEVRNKII
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacaatctaacattacaacgcgccaccggcgtagtcaccgccataaacgga
aacttctccggcggcaagacacaagaaatcgtagtagctcgcggcaaagttcttgatctc
ctccgacccgatgaaaacagcggtaaactccaaactgttctctccgttgaaatctttggt
gcaattcgttccttagctcaatttagactaaccggagctcaaaaagattacattgtcgtc
ggttcggactcgggccggattgtaatttttgaatataataaagagcgtaatgtgtttgat
aaagttcatcaagaaacttttggtaaatctggttgtaggagaatagttccgggtcagtat
ttagcgattgacccgaaaggtagagctgttatgattggtgcttgtgagaaacagaagtta
gtttatgttttgaatagggatactgctgctaggttgaccatttcgtcgcctttagaggcg
cataagtcgcatacaattgtttattctatttgtggcgttgattgcgggtttgataatccg
atttttgcggctattgaattggagtatgctgaggctgatcaagattcgacgggtcaagct
gctagtgaagcgcagaaagtcttgactttttatgaacttgatttgggtcttaatcatgtt
tctaggaaatggtctgagcaagttgataatggggctaatatgcttgttacggtccctggc
ggtggggatggacccagtggtgttttagtttgtgctgagaattttgttatttataagaat
gaagggcatccggatgttagggctgtcattcctaggcgtgcagatttgcctgctgaacgc
ggagttctgattgtgtctgctgcaactcataggcagaagactatgtttttctttctgttg
cagacggaatacggtgatatttttaaggttactctagatcatgagaatgacaaggttaga
gaattgaaaattaagtattttgatacaattccagttactgcgtcgatgtgtgtaatgaaa
ttaggttttctttttgctgcatcagagtttgggaatcacgcattatatcagtttcgagca
attggggaagaagctgatgtggaggcctcatcagctactttaatggaaaccgaggaaggt
ttccaacctgtattttttcagccaagagggctgaagaatcttgttaggattgatcaggtt
gagagcttgatgcccattatggatatgaaggttgccaatgtttttgatgaagaaacagcg
cagatattttcactttgtggacgtggtcctcggtcctctttgaggatattgaggcctggt
ttggccataagtgagatggctgtttcacagcttcctggtgtaccaagtgcagtctggact
gtgaagaagaatgttaatgatgagtttgatgcatatattgttgtgtctttcaacaatgca
actcttgtgctttcaattggagaaacggttgaggaagttaataacagtgggtttcttgat
accacaccttcacttgctgtttctttgattggtgatgattctttaatgcaagttcaccca
aatggtattaggcatataagggaagatgggcgtataaatgagtggagaacacctgggaag
aggactattgtgaaggttggctccaatagagttcaagtggttattgccttaagtggaggg
gagcttatttattttgaggttgatataactggtcagctaatggaggtagagaaatatgag
atgaatggagatgtggcctgtctggatattgccccagttccagaaggaagacaaaggtct
cggttccttgcagttggttcatttgataacaccattcggatcttatctttagatcctgat
gactgtatgcagatactaagcgtccaaagtgtttcttcacctcctgaatcactcctcttc
cttgaggttcaggcatctgtaggtagggaggatagtgctgatcaccctgctagtcttttc
ctaaatgctggtttgcaatctggtgttttattcaggacactggtggacatggtcactggc
caactttctgattctcgttccagatttttggggttgagggcacccaaactcttctccatt
attgtgcgaggacggcgtgcgatgttatgtttatctagtcgaccctggcttggttatatt
catcaaggacatttccttttaactcccctatcttacgagactcttgaatttgctgcttca
ttctcatctgatcagtgtgcggaaggtgtggtggctgttgctggggatgcattgaggatt
tttaccattgaaagattgggagaaacatttaatgaaactgcaatacccctcagatatact
ccgagaaagtttgtgcttcaacctaagaagaaacttttggttattgttgagagtgatcaa
ggagcatatacagctgaggagcgtgaggctgcaaagaaggagtgttttgaggctgctggt
attggggaaaatggaagtgccaatgctgagcagatggagaatggtggcgacgatgaagat
aaagatgatcctctgtctgatgagcagtatggttatcctaaggcagaatcagacaagtgg
gtttcttgcataagagttcttgaccccaggactgccacaacaacttgtctgctagagctt
caagacaatgaagcggcatttagtttgtgcactgtaaacttccatgataaggagcatgga
acattgttagctgttggtactgccaagggactgcagtttttgcccaaaagaagtttagtt
gccggttttattcacatctataagtttgtagatgatgggagaaccctggaacttttgcac
aagacacaggtggaaggtgtaccacttgctttagcccagtttcagggaagactacttgct
ggaatagggcctgcgctcagattgtacgacttggggaagaagaggttgcttaggaaatgt
gagaataagctcttccctaactctattgtctctattcagacctatcgtgataggatctat
gttggtgatattcaagagtcatttcatttctgcaagtataggcgcgatgaaaatcagctc
tatatatttgctgatgattgtgttccaagatggcttacagcatcgcaccatgttgatttc
gatactatggcaggcgcagacaagtttggtaatatctactttgtacggttaccacaggat
gtttctgatgagattgaggaagatccaactggtggaaagataaagtgggagcaaggaaag
cttaatggagctccaaacaagatggaggagatagtacagtttcatgttggtgacgtggtt
actagcttgagtaaagcatctctaattccaggtggtggagagtgcatcatttatgggacg
gtgatggggagcgtgggctcactgcttcctttcacttctcgagatgatgttgacttcttc
tcacacttggagatgcatttgagacaggaccacccacctttgtgtggaagagaccatatg
gcatatagatctgcttattttcctgttaaggatgtgatcgatggggatctgtgtgagcaa
ttcccaacgctgcctcttgatgcacagagaaaaattgctgatgaattggatagaactcct
ggcgagatactgaagaaacttgaagaagttcggaacaagatcatttaa
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