Mercurialis annua (annual mercury): 126660433
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Entry
126660433 CDS
T10153
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126660433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
126660433
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126660433
Spliceosome [BR:
mean03041
]
Complex A
U2 snRNP components
U2 related factors
126660433
Complex B
126660433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Asp_DH_C
Motif
Other DBs
NCBI-GeneID:
126660433
NCBI-ProteinID:
XP_055959904
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All DBs
Position
LG8:complement(37875022..37938609)
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AA seq
933 aa
AA seq
DB search
MEAAVLVERKKDKEKQRDRRSQGDERERSKGRKREREDTVEKGQEDWAKKGRERERRREM
EKREREQEKENRREIRSDDNGEGDSRENGKKRRKRDEDDYRERTCVQSSKEKKTREDDSA
NKEKKTREELEDKQKKLDEEMEKRRRRVQEWQELKRKKEESEKEKHGEVLNNDEPQTGKT
WTLEGDSDDEEVGTSISPNDAMEDDDIIDSLDAYIKSILPEVEKLSNGMKLKKGSEKSLG
RIIAGEDSDSESDNGNTENSESNLVEEDDDEVIKRVKKTKLEKLSVVDHSKIDYRPFRKN
FYKEMKAISRMTSEEVATYRKELELKVHGKDVPNPVKTWNQLGLITKILKTIKKLNYEKP
MAVQTQALPIIMSGRDCIGIAKTGSGKTLAFVIPMLRHIVNQPPVEDGDGPIGLIMAPTR
ELVQQIHSDIRKFAKALGIRCVTVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSGG
KITNLRRVSYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVL
NKPVEFQVGGRSVVNKDITQMVELRPETERFLRLLELLKEWSVKGKILIFAQTQEKCNLL
HRDLLKHGFKCLLFHGARDQMDRESAISNFKMNVCNVMTATSIAARGLDVKELELVINFD
VPNHYEDYVHRVGRTGRAGRKGCAITFISEDDARYAPDLVKALQLSEQVVPQDLKALADG
FMAKVNQGLEQAHGTGYGGSGFKFNEEEDEKMIAARRAQLKEYGYDEEKPESEDEDDGVV
RKTGGGDVSQHNNNALASSASIATPTINITPGAQAKALAASINIHHNIAKILADAMPERH
EAELEINNFPQNARWKVTRKETLGLISEWTGAFITTRGQFFPPGHIPASGDRKLYLFIEG
PSETSVKRAKTELKCVLEDIMNQALSLPGKYSL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgcggttctggtagagagaaagaaggacaaagagaagcaaagggatagaagg
agccagggcgatgaaagagaaaggagtaagggaaggaagagagaacgggaagatacggtg
gagaaaggacaggaagattgggcgaagaaggggcgtgagagggagagacgtagggagatg
gagaaaagagaacgtgagcaggagaaggagaaccgtagagagattaggagcgatgataat
ggtgaaggtgattctagggagaatggcaaaaaacgtcgtaagagagatgaggatgactac
agggagagaacttgtgtgcagagcagtaaagagaagaaaacccgagaggatgactctgct
aacaaagagaagaaaacccgagaggaattggaggataaacagaaaaaattggatgaagaa
atggagaagaggagaagacgagtacaggagtggcaagagctgaagagaaaaaaagaagaa
tctgagaaagaaaaacatggggaagtattaaataatgatgaaccacagacaggtaaaact
tggactctcgaaggagattctgatgatgaagaagttggaacttcaattagtcctaatgat
gctatggaggatgacgatattattgattcattagatgcttacataaagtccatcttacca
gaagtcgagaagctaagtaatggaatgaagctgaagaaaggctctgagaaatcactgggg
agaataattgctggtgaggattctgattcagagtcagataatggtaacactgagaatagt
gaaagcaacttagttgaggaagatgatgatgaagtcataaagagggtcaagaaaacaaaa
cttgaaaagctgtctgttgttgatcactcaaagattgattatagaccatttcgtaaaaat
ttctataaagaaatgaaggcgatatcaagaatgacttctgaagaggttgctacttataga
aaagagttagaattgaaagtacatggcaaagatgttccaaatccagttaaaacatggaac
caacttggactgataactaagattttgaagacaattaagaaacttaattatgagaagcct
atggcagttcaaactcaggcactgccaattataatgagtgggagagactgcatagggatt
gcaaagactggctctggcaaaaccctcgcttttgtgattccaatgctgaggcatatcgtt
aaccagccacctgtggaagatggagatgggccgattgggcttataatggcaccaaccaga
gagcttgttcaacagatacatagtgacataaggaagtttgccaaggcactgggaattaga
tgtgtaacagtgtatggaggttccggtgttgctcaacagatcagtgatttaaagcgggga
actgagattgttgtctgtaccccaggtaggatgatagacatactttgtactagtgggggc
aaaattacaaatcttcgaagagtgtcatatcttgttatggacgaagctgatcgcatgttt
gatatgggttttgaacctcaaatcaccagaattgtacaaaatattcgaccggatcgccaa
actgtactcttttctgcaactttccctcggcaggttgagattttggctcgtaaagtattg
aacaagcctgtggaattccaggttggtgggaggagcgttgtgaacaaggacattacgcag
atggttgagttaaggccagaaactgaaaggttcttgagactgttagagctacttaaagag
tggtctgtgaagggtaagattttgatattcgctcagacgcaggagaaatgcaatttgcta
catagggatttgttaaagcatggctttaaatgccttctttttcatggtgctagggatcaa
atggatcgcgagtcagcaatttccaactttaagatgaacgtctgcaatgtgatgactgcc
acgagtattgctgcccgaggtttggatgtgaaggagcttgaactggtgattaactttgat
gttccaaaccactacgaggattatgttcatcgtgttggtcgaactgggcgagctggtcgc
aaaggttgtgcaatcacttttatttctgaggacgatgcgagatatgcgccagatcttgta
aaagcattacaactctctgagcaagttgttccgcaagacctgaaagctcttgctgatggt
tttatggcaaaagtgaatcagggacttgagcaagcccatggaaccggttatggcggaagt
ggttttaaattcaatgaagaggaggatgaaaagatgatagcagcaaggagagcacaacta
aaggaatatggctatgacgaagagaagcccgagtcagaagatgaagatgacggtgtggtc
cgtaagacaggtggtggtgatgtttcacagcataataataatgcccttgcttcttctgct
tccatagcaacgccaacaattaatatcacacctggagctcaagctaaggcacttgctgct
tccatcaacattcatcataacattgcaaagattcttgctgatgcgatgcctgaacgtcat
gaagcagagctcgagattaataatttcccacaaaatgctcggtggaaggttacccgaaag
gaaacattgggcctgatttctgaatggactggtgctttcatcactaccaggggacagttc
ttcccgccaggtcatattccagcttcaggggatcgaaagctgtacttgttcatcgagggt
cctagtgaaacgtctgttaagagagctaaaacagagcttaaatgtgttttggaagacatc
atgaaccaggcattatcacttcctggaaaatactcactataa
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