Mercurialis annua (annual mercury): 126660709
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Entry
126660709 CDS
T10153
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126660709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mean03021
]
126660709
03019 Messenger RNA biogenesis [BR:
mean03019
]
126660709
Transcription machinery [BR:
mean03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126660709
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126660709
U7-dependent histone pre-mRNA processing factors
126660709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
CCDC3_C
RF-1
Motif
Other DBs
NCBI-GeneID:
126660709
NCBI-ProteinID:
XP_050210307
LinkDB
All DBs
Position
LG8:complement(5386304..5393369)
Genome browser
AA seq
694 aa
AA seq
DB search
MASTAQSPSLKRRDGPVTREGDTLTVTPLGAGSEVGRSCVYMSYKGKTILFDCGIHPAYS
GMAALPYFDEIDPSVIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLILT
DYVKVSKVSVEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVD
IAGVRVLYTGDYSREEDRHLRAAEMPEFSPDVCIIESTYGVQLHQPRHIREKRFTDIIHS
TVSQGGRVLIPAFALGRAQELLLILDEFWSNHPELHNIPIYYASPLAKKCMTVYQTYILS
MNDRIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGGLQSGLSRQLFDMWCTEK
KNACVIPGYVVEGTLAKTIINEPKEVTLMNGLAAPLNMQVHYISFSAHADYAQTSTFLKE
LMPPHIVLVHGEANEMGRLKQKLTTEFTHGNTKIITPKNCQPVEMLFNSEKMAKTIGKLA
EKTPEAGESVNGILVKKGFTYQIMAPEDLHVFSQLSTANITQRITIPFSGAFGVIKHRIE
QIYESVESGTDDESGVPTLQVHERVTVKHESDKHISLHWTADPISDMVSDSVVALVLNIS
REVPKVVVELEAERSEEENEKKAEKVMYALLVSLFGDVKLGGNGKLVISVDGNVAELDKQ
TGDVESENEGLKERVRTVFRRIQRAVKPIPLSVS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacagcacaatcaccatctcttaaaagacgggatggtccggtaacaagggaa
ggagatacgctaactgtaactcctctcggcgcgggcagtgaagttggtcgatcttgtgtc
tacatgtcgtataaagggaaaactattttgtttgattgtggaattcatcctgcttattcg
ggcatggctgccttgccctactttgatgagattgatccttcagttattgatgtacttctc
attacacactttcacttagatcatgctgcatctctaccttatttcttggagaagaccaca
tttaaagggcgtgttttcatgactcatgcaacaaaggctatctacaagctgatattaact
gattatgtgaaagtgagcaaggtttcggttgaagatatgttgtttgatgaacaagacata
aatcgctccatggataaaattgaggttattgacttccatcagacagtggaggtgaatggc
atcaaattttggtgctatacagctggacatgtccttggtgctgccatgttcatggttgac
atagctggtgttcgagttctctatactggagattactcccgtgaagaagatcggcatctt
cgggctgctgagatgccggaattctcccctgacgtttgcataattgaatcgacttatggg
gttcagctccatcaacctcggcatattagggaaaagcggttcactgatataatccactcc
actgtttctcaaggaggccgtgttttaatcccagcatttgcgcttggacgtgcccaagaa
cttctcttaatcctcgacgagttttggtcaaaccatcctgaactccataatattccaata
tactatgcttctcccctagcaaaaaagtgcatgacagtttatcagacatatatcctgtca
atgaatgataggatccgcaatcagtttgcaaactctaaccccttcaaattcaaacacata
tctccactaaatagcattgacgatttcagcgatgtaggcccatcagtggtcatggcaagt
cctggtggactgcaaagcgggttgtcaagacagctatttgatatgtggtgcactgagaag
aagaatgcttgtgttatacctggatatgttgttgagggaaccctagctaaaaccatcatc
aatgaaccgaaggaggtcactctaatgaatggactagctgctccattgaatatgcaggta
cattatatttccttctctgcccatgctgattatgctcagacaagtactttcttgaaagaa
ctcatgcctcctcacatagttcttgttcatggcgaagctaatgagatgggaaggctcaaa
cagaagctcacgacagagtttacacatggaaacaccaaaatcattactccaaaaaactgt
cagcctgttgagatgcttttcaattcggaaaagatggcaaaaactattgggaaactggca
gaaaagaccccagaagccggtgaatctgtcaatggcatactagttaagaaaggctttact
taccagatcatggcccccgaagatcttcatgtgttttcacaattatcaactgcaaatatt
actcagaggataactattccattctctggtgcctttggtgtaattaaacaccgaattgag
cagatttatgagagtgtggaatccgggacagatgatgagtctggggttccaacattgcaa
gtgcatgagcgagtgacagtgaaacatgagtctgacaaacatatttcacttcattggaca
gcagatcctatcagtgatatggtctcggactcagtggtagctctagttttgaacatcagt
cgagaggttcccaaggtcgtggtagagttggaggctgagagatcggaggaagaaaatgag
aaaaaagcagaaaaggttatgtatgcacttcttgtttcactttttggagatgtgaaacta
ggtgggaatgggaagcttgtcataagtgttgatggaaacgtggccgagctagacaaacag
accggggatgttgaaagtgaaaatgaaggtctcaaggaaagagtgaggactgtgtttagg
agaattcaaagagcagttaagccgattccgctttccgtgtcatag
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integrated database retrieval system
