Mercurialis annua (annual mercury): 126660839
Help
Entry
126660839 CDS
T10153
Name
(RefSeq) uncharacterized protein LOC126660839
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126660839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126660839
03041 Spliceosome [BR:
mean03041
]
126660839
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126660839
Spliceosome [BR:
mean03041
]
Complex B
Other components
Prp19-related factors
126660839
Complex C
126660839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_19
TPR_15
NRDE-2
ARM_TT21
TPR_5
DUF6324
PPR
Motif
Other DBs
NCBI-GeneID:
126660839
NCBI-ProteinID:
XP_050210489
LinkDB
All DBs
Position
LG1-X:2536809..2541607
Genome browser
AA seq
920 aa
AA seq
DB search
MSIPKELYPSQEDLLYEEELLRNPFSLKLWWRYLVARREAPFKKRFVIYERSLKALPGSY
KLWHAYLKERLEIVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLESLTKQQLITR
TRKTFDRALCALPVTQHDRIWELYLKFVSQEGMPIETSLRVYRRYLKYDPSHIEDFIEFL
VNSQLWQESAERLASVLNDDQFYSIKRKTKHTLWLELCELLTKHAKEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLADYYIRRGLFEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESMV
AHKMEHLDLSDEEDDSLDENDDEKVEDVRMEVNSKFEKMILKGFWLHDDKDVDLMLARLE
YLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPH
TLWVAFAKLYETHNDLVNARVIFDKAVQVNYKTVDNLASIWCEWTEMELRHKNFNGALEL
LRRATAEPSVEVKRRVAADGNEPVQMRLHKCLRLWTFYVDMEEGLGDLESTRAVYERILD
LKIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDLWVTYLSKFVKRYGKTK
LERARELFEHAISMAPADAVKPLYLQYAKLEEDCGLAKRAMQVYDQSTKAVPNNEKLGMY
EIYIARAAEIFGVPKTREIYEQAIEAGLPDKDVKTMCLKYAKLEKNLGEIDRGRAIYVFA
SQFADPRSDAEFWNEWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQR
LNIDEAKDKLKQAGVPEDEMAALERQLTAPLANNTTAKDSGRKVGFVSAGVESQTDDGVV
KLNANREDIEIPEESDSEDDDETVEITQKDVPSAVFGGLAGKRSEMENDKAGDDTTAAAK
ANDGESRLGALARLKRQRQG
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtctatacccaaggagctctacccttctcaagaggatctcttgtacgaagaggagctc
ctcagaaatcctttcagtttgaagctatggtggcgctacctggtggcccgccgtgaagct
ccgttcaagaagcggtttgttatttatgagaggtcactcaaagctctacccggtagttat
aagctttggcacgcttatctcaaggagcgtctcgaaattgtaagaaacttacccattact
cattcccaatatgaaaccctaaataatacatttgaaagagctttggttacgatgcataaa
atgcccagaatttggattatgtacttggagagtttgacgaagcagcagttgattacgcgt
actcggaaaacttttgacagggcgctttgtgcgttgcctgtaacacagcatgacaggatt
tgggagctgtatttgaagtttgtgagtcaggagggtatgccgatcgagacttcgcttagg
gtttacaggagatacttgaagtatgatcctagtcatattgaggattttattgagtttttg
gtgaattcgcagctttggcaagagtcggctgagaggttagcttctgtacttaatgatgat
caattttattcgattaaaaggaaaacgaagcatacgctgtggttagaattgtgtgagttg
cttactaagcatgcgaaggaggtgtctggtttgaatgtagatgctattattagaggtggt
attaggaagtttacagatgaggttggcaggttgtggacgtcgcttgctgattattacatc
cgaagggggttgtttgagaaggcgagggatatttttgaggagggtatgactactgtggtt
acagttagggattttagtgttatttttgatgcatattcacagtttgaagagagtatggtt
gctcataagatggagcatttggatttgagtgatgaggaagatgattcccttgatgagaat
gatgacgagaaagttgaagatgttcgtatggaagtaaactctaagtttgagaagatgata
ctaaaaggattttggttacatgatgataaagatgtagatttgatgctggcccggttggaa
tatctcatggataggagaccagaattggctaatagtgtacttctacggcaaaatccacat
aatgtggaacaatggcacaggagggttaagctttttgagggtaacccaactaagcagata
ctgacttatactgaggcagtaaggacagttgatcctatgaaagcagtggggaaaccccac
acgttgtgggttgcgtttgctaagctgtatgaaactcacaatgatcttgtcaatgcaagg
gtaatttttgacaaggcagtgcaagtgaactataaaactgtagataatctagctagcatc
tggtgtgagtggactgaaatggaacttagacacaaaaacttcaatggtgcactagagctg
ttgagacgggccacagcagaaccatcagttgaggtcaaacggagagttgctgctgatggc
aatgaaccagtacagatgaggctgcacaagtgcctcagactctggaccttctatgtcgat
atggaagagggccttggagacttggaatccactcgagcagtttatgagcggattctggac
cttaaaatagccacaccacagattattatcaattatgctttgcttctagaagaacataaa
tattttgaagatgctttcaaggtatatgaaaggggagtgaaaatattcaaatatcctcac
gtgaaagacttatgggtcacatatctttcaaagtttgtgaaaagatacgggaagacaaaa
ttggaacgggcaagagagttgtttgaacatgctatcagcatggctcctgctgatgcggtg
aaacctttgtaccttcaatatgcgaagctggaagaagattgtggtttggcaaagcgagct
atgcaggtttatgatcaatcaactaaagctgtccctaataatgaaaagttgggaatgtat
gaaatctatattgcccgtgctgctgagatatttggtgtccccaagacaagagagatttat
gagcaagccattgaggccggtctccccgacaaagatgtaaaaacaatgtgtttgaagtat
gccaagttggaaaagaacttgggcgaaattgatcgtgggcgtgccatatatgtatttgca
tctcagtttgctgatccacgatctgatgccgaattctggaatgagtggcatgaattcgag
gtgcaacatggcaacgaggacacgtttcgagaaatgttgcgtattaaacgaagtgtttct
gcaagctatagccagacacactttatcctgccggagtatttgatgcagaaggatcaaagg
ctaaacattgatgaggctaaagacaagttgaaacaagctggggtgcctgaagatgaaatg
gctgctctagaaaggcagttaactgccccgttggccaacaatacaactgcaaaagatagc
ggcaggaaagtcgggtttgtgagtgctggggtagaatcccagactgacgatggagtggtg
aagcttaatgcaaaccgtgaggacatcgaaataccagaagaaagcgactctgaagatgat
gatgaaacagttgaaattacgcaaaaagatgttccatctgctgtcttcggaggattggct
gggaagaggagcgagatggaaaacgataaagccggagatgacaccactgccgccgcaaag
gccaacgatggcgaaagccgtcttggtgcgcttgccagactaaaaagacaaagacaaggc
tga
DBGET
integrated database retrieval system
