Mercurialis annua (annual mercury): 126662268
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Entry
126662268 CDS
T10153
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126662268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mean04121
]
126662268
03036 Chromosome and associated proteins [BR:
mean03036
]
126662268
Ubiquitin system [BR:
mean04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126662268
Chromosome and associated proteins [BR:
mean03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
126662268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
MIOS_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
126662268
NCBI-ProteinID:
XP_050212148
LinkDB
All DBs
Position
LG8:complement(31625892..31627172)
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AA seq
334 aa
AA seq
DB search
MDNPTEETHLKSKNSITYDSPHPIYAMAFSSATDHRRMAVGSFIEEYNNRVDILSFNTDT
LSFTPHPPLSFNHPYPPTKLMFNPSSLHKPDLLASSGDYLRLWEVNGNATEPVSVLNNSK
SSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGCVETQLIAHDKEVYDIAWGEAR
VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMESNKVVI
LDIRSPTMPVAELERHKASVNAIAWAPQSCRHICSVGDDAQALIWDLPSVAGPNGIDPMS
MYSAGSEINQLQWSAAQPDWIAIAFSNRMQLLKV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggataatcccacagaagaaacccatctcaaatccaaaaactccataacctacgactcc
ccacacccaatttacgccatggctttctcctccgccaccgaccaccgccgcatggcggtg
ggcagcttcatcgaagagtacaacaacagagtagacatcctctcattcaacacagacacc
ctttcttttactcctcatccgccgctttcatttaaccacccgtacccaccaactaagctc
atgttcaacccgtcttctcttcacaaacccgacttactagcttcctccggcgactatctc
cgcctctgggaggtcaatggtaacgctactgaacccgtctcggttttaaataatagtaaa
agtagtgaattttgtgctcctttaacttcatttgattggaatgagattgaacctaagaga
attggaacttgtagcattgatacgacgtgtactatttgggatatcgaaaagggttgtgtc
gaaacgcagttgatcgcgcacgataaagaggtttacgacattgcttggggtgaagctaga
gtctttgcttctgtttctgctgatgggtctgttaggatttttgatttgagagataaggag
cactctacgattatttatgagagtccgcagcctgatacgcctttgcttaggttagcttgg
aataagcaggatttgaggtatatggctactattttgatggagagtaataaagttgtgatc
ttggatattcggtctcctactatgcccgttgcggagttggagaggcataaggctagtgtt
aacgcgattgcgtgggctcctcagagctgtagacatatttgctctgttggggatgatgct
caggctcttatttgggatttgcctagtgttgctggtcctaatgggattgatcccatgtct
atgtattctgctggttctgaaattaatcagcttcaatggtctgcagctcagcctgattgg
attgctattgcgttttctaatcgaatgcagcttttgaaagtttga
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