Mercurialis annua (annual mercury): 126665004
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Entry
126665004 CDS
T10153
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03440
Homologous recombination
mean03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126665004
03460 Fanconi anemia pathway
126665004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mean04121
]
126665004
03036 Chromosome and associated proteins [BR:
mean03036
]
126665004
03400 DNA repair and recombination proteins [BR:
mean03400
]
126665004
Ubiquitin system [BR:
mean04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126665004
Chromosome and associated proteins [BR:
mean03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
126665004
DNA repair and recombination proteins [BR:
mean03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
126665004
FA (Fanconi anemia) pathway
Downstream FA components
126665004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
126665004
NCBI-ProteinID:
XP_050213611
LinkDB
All DBs
Position
LG1-X:7454476..7463322
Genome browser
AA seq
1126 aa
AA seq
DB search
MSTWHICKDVGGNFRWESSGKILQNKPQNEQPHKPTLPPLPSMADLLYQGCSKLVDNRDE
DEGIFRTGLGRSVAIKQSSIDKAFAVLGSYDEDCDYNFDAISSVRLTGKTQARENEHGFT
NSLFRTASGKPVDVSSAGLVRAKTLLGLEISNDGNKGFQLPRKSSISEQNQLQNLPKSSM
EKSVKNHAMHDALPVLRPSSLSRTSLNGHRLSTAGNSNMMDSEVCNSTPKPPSIKFHTAG
GRSLSVSSDALERAKRILGDPDIGTFLNEDLVDPTLSGLKENRIGDALSTKKAHFHSAFT
YPGAAKSKHISKSFISPLKSSLHQDEAVQSFSNAEKNVLAVSLLKKFDAADDNKSHGSNG
TTSSMQKLLPNSPSERNALVDNSLAYGNGSMVNSLSRSSNGPLVDISNTVGNNYINHNHS
NGERKRLGRRTSTPPFKRPRSSKFTTPYNRNVAYAPSGLSSSSSESSCRRHTVSTRYPFQ
CPRMYIKEFFKELHLDKSMLEHITDQVRCIKPVTAENYTFCDESGASCIGSEAFQQMLVL
SGASVQFASKEWVINHYKWIVWKLACYERFCQLKFAKRFLTVSNVLEELKYRYEREVNHG
HRSAIKRILEGDSPPSSMLVLCISAIDISCKTNIETRALNGSDCSNGGRVELTDGWYSVG
AVLDVPLSKQLAAGKLFVGQKLRIWGAALCGWGGPVSPLELLASRTASLLLHVNGTYRSH
WADRLGFCKNVIPLAFRCIKSNGGLIPQTLVGVTRIYPVLYKEKLSNGGSIVRSERMESK
AMHMFNQRKSALIEGIISEFQREMKGSHVYNDSDSEEGAKIMKVLEAASEPEVLMAGMSL
EQLTSFASYQAKLEANKQLDMEKAIEKALTDAGLSEREVTPFMRVRVVGLSTYPKKGGVK
EGLLTIWNPTEKQQSELVEGQSYAVAGLLPVNSDSYMLYLQARGSTTKWQPLSTLATQSF
QPFFSPRVSVSLSNLGEVPLSNEFDTAAYVVHVGEVYASAHSKKQWVFVTDSSISTSKSE
EISNSLLAISFCSPYVNDDSFTPINCNLVGTTVGFINLIKKAKDQMNHVWTAEATENSTY
LLSFDSLKCSHLKSAATAVQTWAKTSSMIVDKLKAKILFIVGNRKG
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcatatatgcaaagacgtcggaggtaatttccggtgggaatcatcaggc
aaaatcctccaaaacaagccccaaaatgaacaaccacataagcctactcttccacctctc
ccttccatggctgatctcctatatcaaggatgttcgaagcttgtggataatagagacgaa
gatgaaggaatattccgtacaggattagggagatccgttgcgattaaacaatcttcaatt
gataaagcatttgctgttcttggctcttacgatgaagattgcgattataattttgatgca
attagctcagtacgcttgacaggtaaaactcaagctagggaaaatgaacatggattcacc
aactctcttttccgtactgcatctgggaagccagttgatgtatcttctgctggtctggtt
agagccaagacactgttgggtcttgagattagtaatgatggaaataagggttttcagctt
cctaggaaatcatcaatttctgagcaaaatcagttgcaaaatttacctaaatcaagtatg
gaaaagagtgtgaaaaatcatgcaatgcatgatgctctaccagttctaaggccatcttca
ctttctaggactagtttaaatggacataggctatcaacagcaggcaattcaaacatgatg
gattcagaagtatgtaattctacacccaaaccaccttcaatcaaattccacactgcaggt
ggaagatccttatcagtttccagtgatgcattagaacgtgcaaagaggattcttggcgac
ccagatattggaactttcttaaatgaggatttagttgatccaaccctttcaggtttgaaa
gagaatagaatcggtgatgctttatccaccaagaaagcacactttcactctgcatttact
tatccaggagctgcaaagagcaagcatatctcaaaaagtttcatatcccctcttaaatca
tctttacaccaagatgaggctgttcagtctttttcaaatgcagaaaaaaatgttctggca
gttagtttgcttaagaaatttgatgcagctgacgacaataagtctcacgggtcaaatggt
actacatcttctatgcaaaagctcttacctaatagcccttctgaacgtaatgcattagtg
gataattccttggcatatggtaatggttcaatggttaattcactttctcgatcatctaat
ggtccgttggttgacatctcaaacacagttggtaacaattacataaatcataatcacagc
aatggtgaaagaaagagacttggaaggagaacctctactcctccattcaagaggccccgc
agttccaaatttacgaccccctacaacaggaatgtcgcttatgctcctagtggtttatct
tcttcatcatccgaaagttcttgccgtagacatacagtttccactagatatccttttcaa
tgtccaaggatgtatatcaaggaattttttaaagagcttcatttagacaaaagcatgtta
gagcacatcacagaccaagtaagatgtatcaaaccagtcacagcagagaattatactttc
tgtgatgaatctggcgcgagctgcattggatccgaagcttttcagcaaatgctggttctg
tctggagcttcagtacaatttgcttctaaagaatgggtaattaaccattacaagtggata
gtttggaaacttgcatgctatgagagattctgtcaattgaaatttgccaaaagatttttg
acggtctccaatgtgctcgaggaactgaagtatagatatgaaagagaagtgaatcatggc
catcgttctgcaattaagagaattctagaaggagattctccaccttcttcaatgttagtt
ctatgcatttcagctattgacatcagttgtaaaacaaatatagagactcgagcattaaat
gggagtgattgtagtaatggtggaagagtggaacttactgatgggtggtattctgtaggt
gctgttttagatgtaccattgtcaaagcaacttgctgctggaaaattgtttgtgggacag
aagcttcgaatatggggagcagcattatgtggctggggtggccctgtttcaccccttgaa
cttcttgcatcaaggactgcgagtttattgttgcatgtaaatggaacctatagatctcat
tgggccgaccgactaggattctgtaagaatgttattcctttggcatttaggtgcatcaag
agcaatgggggtcttattcctcaaacactggttggagtgacacgaatataccctgttctg
tacaaggagaaattaagtaatggtggatctattgtgagatcagaaagaatggagtcgaag
gcaatgcacatgttcaatcagaggaaatctgctttgatagaaggcattatctctgaattc
caaagagagatgaaaggatctcatgtctacaatgatagcgatagcgaagaaggtgctaaa
attatgaaggttcttgaggctgcatcagaaccagaagttttaatggcagggatgagtcta
gagcagctaacatcatttgcctcctaccaagcaaaactagaggcaaataagcagttggac
atggagaaagcaattgagaaagctttgacagacgctggcttgagtgaaagagaagtaact
ccatttatgagggttagagtagttggattaagtacgtatccaaaaaaaggtggtgttaaa
gaaggtttgctaacaatttggaatccaactgaaaagcagcaaagtgagctggttgagggt
cagtcatatgctgttgcaggacttttaccagtgaactcagattcctacatgctttactta
caagcaagaggatctacaaccaaatggcagcccttatctaccctagcaacccaaagtttt
cagccctttttcagtcctcgagtatccgtatcattgtccaatttgggcgaagttcccctt
tccaatgaatttgatactgctgcatatgttgtccatgtgggagaggtttatgcatctgct
cattcaaagaaacaatgggtgtttgttactgacagctccatttctacctctaagtctgaa
gaaatatcaaattccttgcttgccatcagcttttgctcgccatatgtaaacgatgattca
tttacaccaatcaactgtaatcttgtaggaaccactgttggcttcattaatctcattaag
aaagcgaaggaccagatgaatcatgtatggacggcagaagcaacagaaaactcaacttac
ttattaagttttgattctctaaaatgttctcacctgaaaagtgctgctactgctgttcaa
acctgggcaaagacctctagcatgattgttgataaacttaaggcaaaaattctatttatt
gttggaaatcgtaaaggctaa
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