Mercurialis annua (annual mercury): 126665004
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Entry
126665004 CDS
T10153
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03440
Homologous recombination
mean03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126665004
03460 Fanconi anemia pathway
126665004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mean04121
]
126665004
03036 Chromosome and associated proteins [BR:
mean03036
]
126665004
03400 DNA repair and recombination proteins [BR:
mean03400
]
126665004
Ubiquitin system [BR:
mean04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126665004
Chromosome and associated proteins [BR:
mean03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
126665004
DNA repair and recombination proteins [BR:
mean03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
126665004
FA (Fanconi anemia) pathway
Downstream FA components
126665004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
126665004
NCBI-ProteinID:
XP_050213611
LinkDB
All DBs
Position
LG1-X:7454476..7463322
Genome browser
AA seq
1126 aa
AA seq
DB search
MSTWHICKDVGGNFRWESSGKILQNKPQNEQPHKPTLPPLPSMADLLYQGCSKLVDNRDE
DEGIFRTGLGRSVAIKQSSIDKAFAVLGSYDEDCDYNFDAISSVRLTGKTQARENEHGFT
NSLFRTASGKPVDVSSAGLVRAKTLLGLEISNDGNKGFQLPRKSSISEQNQLQNLPKSSM
EKSVKNHAMHDALPVLRPSSLSRTSLNGHRLSTAGNSNMMDSEVCNSTPKPPSIKFHTAG
GRSLSVSSDALERAKRILGDPDIGTFLNEDLVDPTLSGLKENRIGDALSTKKAHFHSAFT
YPGAAKSKHISKSFISPLKSSLHQDEAVQSFSNAEKNVLAVSLLKKFDAADDNKSHGSNG
TTSSMQKLLPNSPSERNALVDNSLAYGNGSMVNSLSRSSNGPLVDISNTVGNNYINHNHS
NGERKRLGRRTSTPPFKRPRSSKFTTPYNRNVAYAPSGLSSSSSESSCRRHTVSTRYPFQ
CPRMYIKEFFKELHLDKSMLEHITDQVRCIKPVTAENYTFCDESGASCIGSEAFQQMLVL
SGASVQFASKEWVINHYKWIVWKLACYERFCQLKFAKRFLTVSNVLEELKYRYEREVNHG
HRSAIKRILEGDSPPSSMLVLCISAIDISCKTNIETRALNGSDCSNGGRVELTDGWYSVG
AVLDVPLSKQLAAGKLFVGQKLRIWGAALCGWGGPVSPLELLASRTASLLLHVNGTYRSH
WADRLGFCKNVIPLAFRCIKSNGGLIPQTLVGVTRIYPVLYKEKLSNGGSIVRSERMESK
AMHMFNQRKSALIEGIISEFQREMKGSHVYNDSDSEEGAKIMKVLEAASEPEVLMAGMSL
EQLTSFASYQAKLEANKQLDMEKAIEKALTDAGLSEREVTPFMRVRVVGLSTYPKKGGVK
EGLLTIWNPTEKQQSELVEGQSYAVAGLLPVNSDSYMLYLQARGSTTKWQPLSTLATQSF
QPFFSPRVSVSLSNLGEVPLSNEFDTAAYVVHVGEVYASAHSKKQWVFVTDSSISTSKSE
EISNSLLAISFCSPYVNDDSFTPINCNLVGTTVGFINLIKKAKDQMNHVWTAEATENSTY
LLSFDSLKCSHLKSAATAVQTWAKTSSMIVDKLKAKILFIVGNRKG
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcatatatgcaaagacgtcggaggtaatttccggtgggaatcatcaggc
aaaatcctccaaaacaagccccaaaatgaacaaccacataagcctactcttccacctctc
ccttccatggctgatctcctatatcaaggatgttcgaagcttgtggataatagagacgaa
gatgaaggaatattccgtacaggattagggagatccgttgcgattaaacaatcttcaatt
gataaagcatttgctgttcttggctcttacgatgaagattgcgattataattttgatgca
attagctcagtacgcttgacaggtaaaactcaagctagggaaaatgaacatggattcacc
aactctcttttccgtactgcatctgggaagccagttgatgtatcttctgctggtctggtt
agagccaagacactgttgggtcttgagattagtaatgatggaaataagggttttcagctt
cctaggaaatcatcaatttctgagcaaaatcagttgcaaaatttacctaaatcaagtatg
gaaaagagtgtgaaaaatcatgcaatgcatgatgctctaccagttctaaggccatcttca
ctttctaggactagtttaaatggacataggctatcaacagcaggcaattcaaacatgatg
gattcagaagtatgtaattctacacccaaaccaccttcaatcaaattccacactgcaggt
ggaagatccttatcagtttccagtgatgcattagaacgtgcaaagaggattcttggcgac
ccagatattggaactttcttaaatgaggatttagttgatccaaccctttcaggtttgaaa
gagaatagaatcggtgatgctttatccaccaagaaagcacactttcactctgcatttact
tatccaggagctgcaaagagcaagcatatctcaaaaagtttcatatcccctcttaaatca
tctttacaccaagatgaggctgttcagtctttttcaaatgcagaaaaaaatgttctggca
gttagtttgcttaagaaatttgatgcagctgacgacaataagtctcacgggtcaaatggt
actacatcttctatgcaaaagctcttacctaatagcccttctgaacgtaatgcattagtg
gataattccttggcatatggtaatggttcaatggttaattcactttctcgatcatctaat
ggtccgttggttgacatctcaaacacagttggtaacaattacataaatcataatcacagc
aatggtgaaagaaagagacttggaaggagaacctctactcctccattcaagaggccccgc
agttccaaatttacgaccccctacaacaggaatgtcgcttatgctcctagtggtttatct
tcttcatcatccgaaagttcttgccgtagacatacagtttccactagatatccttttcaa
tgtccaaggatgtatatcaaggaattttttaaagagcttcatttagacaaaagcatgtta
gagcacatcacagaccaagtaagatgtatcaaaccagtcacagcagagaattatactttc
tgtgatgaatctggcgcgagctgcattggatccgaagcttttcagcaaatgctggttctg
tctggagcttcagtacaatttgcttctaaagaatgggtaattaaccattacaagtggata
gtttggaaacttgcatgctatgagagattctgtcaattgaaatttgccaaaagatttttg
acggtctccaatgtgctcgaggaactgaagtatagatatgaaagagaagtgaatcatggc
catcgttctgcaattaagagaattctagaaggagattctccaccttcttcaatgttagtt
ctatgcatttcagctattgacatcagttgtaaaacaaatatagagactcgagcattaaat
gggagtgattgtagtaatggtggaagagtggaacttactgatgggtggtattctgtaggt
gctgttttagatgtaccattgtcaaagcaacttgctgctggaaaattgtttgtgggacag
aagcttcgaatatggggagcagcattatgtggctggggtggccctgtttcaccccttgaa
cttcttgcatcaaggactgcgagtttattgttgcatgtaaatggaacctatagatctcat
tgggccgaccgactaggattctgtaagaatgttattcctttggcatttaggtgcatcaag
agcaatgggggtcttattcctcaaacactggttggagtgacacgaatataccctgttctg
tacaaggagaaattaagtaatggtggatctattgtgagatcagaaagaatggagtcgaag
gcaatgcacatgttcaatcagaggaaatctgctttgatagaaggcattatctctgaattc
caaagagagatgaaaggatctcatgtctacaatgatagcgatagcgaagaaggtgctaaa
attatgaaggttcttgaggctgcatcagaaccagaagttttaatggcagggatgagtcta
gagcagctaacatcatttgcctcctaccaagcaaaactagaggcaaataagcagttggac
atggagaaagcaattgagaaagctttgacagacgctggcttgagtgaaagagaagtaact
ccatttatgagggttagagtagttggattaagtacgtatccaaaaaaaggtggtgttaaa
gaaggtttgctaacaatttggaatccaactgaaaagcagcaaagtgagctggttgagggt
cagtcatatgctgttgcaggacttttaccagtgaactcagattcctacatgctttactta
caagcaagaggatctacaaccaaatggcagcccttatctaccctagcaacccaaagtttt
cagccctttttcagtcctcgagtatccgtatcattgtccaatttgggcgaagttcccctt
tccaatgaatttgatactgctgcatatgttgtccatgtgggagaggtttatgcatctgct
cattcaaagaaacaatgggtgtttgttactgacagctccatttctacctctaagtctgaa
gaaatatcaaattccttgcttgccatcagcttttgctcgccatatgtaaacgatgattca
tttacaccaatcaactgtaatcttgtaggaaccactgttggcttcattaatctcattaag
aaagcgaaggaccagatgaatcatgtatggacggcagaagcaacagaaaactcaacttac
ttattaagttttgattctctaaaatgttctcacctgaaaagtgctgctactgctgttcaa
acctgggcaaagacctctagcatgattgttgataaacttaaggcaaaaattctatttatt
gttggaaatcgtaaaggctaa
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