Mercurialis annua (annual mercury): 126667501
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Entry
126667501 CDS
T10153
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03013
Nucleocytoplasmic transport
mean03015
mRNA surveillance pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126667501
09122 Translation
03013 Nucleocytoplasmic transport
126667501
03015 mRNA surveillance pathway
126667501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126667501
03041 Spliceosome [BR:
mean03041
]
126667501
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126667501
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126667501
Spliceosome [BR:
mean03041
]
Complex C
Other components
EJC/TREX
126667501
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126667501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
YihI
Motif
Other DBs
NCBI-GeneID:
126667501
NCBI-ProteinID:
XP_050216445
LinkDB
All DBs
Position
LG2:50831966..50836672
Genome browser
AA seq
428 aa
AA seq
DB search
MGETRDTEAYEEELLDYEEEEEKVPDLVAARVNGESAKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTAGQVIALV
LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKNHKDLLKNECPHIVVGTPGRILA
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKDIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVN
RTAELNKLLVECNFPSICIHSGISQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaacaagggacaccgaggcttacgaggaggagcttctcgattatgaggaggag
gaagagaaagtccctgatcttgttgctgctagagtcaatggcgagtccgccaagaagggc
tatgttggcatacacagttccggattcagagacttcttgttgaaaccagagcttctccgg
gccatcgtcgactcgggatttgagcatccttctgaagttcaacatgaatgcatccctcaa
gccatcttgggcatggatgtcatctgccaagctaaatctggaatggggaagacggcggtt
tttgttttatctacactacagcaaattgaacctactgctggccaagttattgctcttgtt
ctatgtcatactagggagttggcataccagatttgtcacgagttcgagaggttcagcaca
tatctacctgatacaaaggttgctgttttttatggcggtgttaatatcaagaatcacaaa
gatttgttgaaaaatgaatgcccacatattgtcgtcggcacacctggaaggatactggca
ctggcaagagataaagacctctctttgaagaatgtgaggcattttatccttgatgaatgt
gacaagatgcttgaatcacttgacatgaggagagatgtccaggagatcttcaagatgact
ccacatgataagcaagttatgatgttttctgcaacactcagcaaagatatccgcccggtt
tgcaaaaaatttatgcaagatcctatggaaatttacgttgatgatgaagccaagttgacc
ctccatggtctcgtgcagcactacatcaaattgactgagctggaaaagaacagaaagttg
aatgatcttctcgatgcactggactttaatcaagttgttatctttgtaaaaagtgtgaac
agaacagctgagctgaacaagttgcttgtagaatgcaattttccatcaatttgcattcat
tctggcatctcacaagaggaaaggctgacacgctacaagggattcaaggagggtcataaa
agaattcttgtggccacagatttagttggtcggggaattgatattgagcgggtcaatatt
gttatcaattatgacatgccggattctgccgatacttatctgcacagagtcggtagagct
ggtagatttggcaccaaggggcttgcaattacgtttgtttcatctgcttcggactctgat
gttctaaatcaggttcaggagaggttcgaggtggatataaaggagcttccagagcagata
gatacatctacatacatgccgtcgtaa
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