Mercurialis annua (annual mercury): 126669021
Help
Entry
126669021 CDS
T10153
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03030
DNA replication
mean03420
Nucleotide excision repair
mean03430
Mismatch repair
mean03440
Homologous recombination
mean03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126669021
03420 Nucleotide excision repair
126669021
03430 Mismatch repair
126669021
03440 Homologous recombination
126669021
03460 Fanconi anemia pathway
126669021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mean03000
]
126669021
03032 DNA replication proteins [BR:
mean03032
]
126669021
03400 DNA repair and recombination proteins [BR:
mean03400
]
126669021
Transcription factors [BR:
mean03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126669021
DNA replication proteins [BR:
mean03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126669021
DNA repair and recombination proteins [BR:
mean03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126669021
MMR (mismatch excision repair)
126669021
DSBR (double strand breaks repair)
HR (homologous recombination)
126669021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
OB_MEIOB_N
DUF223
zf_DPOE_2
zf-like
RMI1_C
Motif
Other DBs
NCBI-GeneID:
126669021
NCBI-ProteinID:
XP_050218256
LinkDB
All DBs
Position
LG2:53455857..53458774
Genome browser
AA seq
670 aa
AA seq
DB search
MRLNLTPNAISMMNGGDLNLKPLVQVLDIKQLGGAQERYRLLISDSVSTHHAMLGTQLND
LVRNSLVKKGSVIQLVEYICSDVQNRKIIVVLNLVTLESDYDTIGNPKMLADINPQKPFP
SGNSVQSAWAGYNNSSGPSRGNNVQNFESPLRASNQGSSMHSFRPAMTSPNSGNNVQTYR
SNFSAQNRGNNMQSFQPTVQPPYQPPPIYKNHGAIMKNEAPARIIPIAALNPYQGRWAIK
ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFHEVIEVGRVYLISK
GSLKPAQKNFNHLKNEWEIFLEATSDVDLCPDEDNSIPQQQFAFKPISEIEIVENNTILD
VIGIVISVNPSVPILRKNGMETQRRILNLKDASGKSIELTLWGDFCNKEGQQLQEIVDSG
VFPVLAVKAAKVSDFSGKSLGTISSTQLVINPDIPEAHGLKDWFDLGGQNSASVSISRDV
LPGVSKNEIRKTVSQIKHEGLGRSDKPDWVTVSARITFVKTDTFCYTACPLMIGDRQCNK
KVTSSGNSRWQCDRCNQEFDECDYRYLLQVQVQDHTGLTWVTAFQESGEEILGLPAKELY
QMKYELQDDTKFSDIMRSRLFQQFLLKLKIKEEMYGDEQRVKITVVKADKVNYSSESRYL
LDLITKSPRY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaaatctaacgccaaacgctatatccatgatgaacggcggcgatttaaacttg
aaaccgctcgttcaggttctcgatataaagcaactaggaggcgcgcaagagaggtaccgt
ttgcttatctctgactcggtctccactcatcacgctatgctcggtactcaactcaacgac
ctagttagaaacagtcttgttaagaaaggatctgtcattcaattggtcgagtacatttgc
agcgacgtccaaaatcgcaagattattgtggtgttgaacttggtaactctagagtcggat
tatgatactattggaaatccaaaaatgcttgctgatataaatccgcagaagccatttcct
agtggaaactctgtacaatctgcatgggctggttataacaattcaagtggccctagccgt
ggcaacaatgttcagaattttgagtctcctttgagggcgtcaaatcagggctctagtatg
catagtttccgaccagctatgacctctccaaattctggaaataatgtgcaaacttatcgg
tctaatttcagtgcacaaaatcgtgggaataatatgcagagtttccagccaactgttcaa
cctccatatcaaccacctccaatttataaaaatcacggtgctattatgaaaaatgaggca
ccagcacgtataattcctattgctgctttgaatccttatcaggggcggtgggctatcaag
gctagggtaactgcaaaaggggatctgcgtcgctacaacaatgctcgaggagatggtaaa
gtgttctcttttgaccttcttgactctgatggaggggaaatacgggtgacctgtttcaat
gctgttgttgaccgctttcatgaagttattgaggttggtagagtttatttgatttcaaaa
ggtagtttaaaacctgcacagaagaattttaaccatttgaagaatgagtgggagatattt
ttggaggccacttcagatgtggatctttgtcccgatgaagacaattccataccacaacag
cagttcgcctttaaacccattagtgaaattgagattgtagaaaacaataccatccttgat
gttataggtattgtgatatctgttaacccttcagttcctatcttgagaaagaatggtatg
gaaactcagagaagaattttgaatctgaaggatgcgtctggcaagagcattgagctgacc
ctttggggcgatttctgcaataaggaaggtcaacagctgcaggagattgtcgattctgga
gttttcccagttttagctgtcaaagcagcgaaggttagcgacttcagtggaaaatcacta
gggacaatttcttctactcagcttgtcattaatccagatattcctgaggctcatggcctg
aaagattggtttgatctagggggacaaaactctgcttctgtgtcaatctccagagatgtt
ttgccaggagtatctaagaatgagatacgtaaaactgtttctcaaatcaagcatgaaggt
ctcgggaggtcggataagccagattgggtcacagtgagtgcgagaatcacttttgtcaaa
acagatacattctgttacacagcttgcccattgatgattggagacagacaatgcaacaag
aaagtgacaagttcaggaaactcaagatggcaatgtgatagatgcaatcaggaatttgat
gaatgcgattatcgatatcttcttcaggttcaggttcaagaccatactggattgacttgg
gtaacagctttccaggaatctggggaggagatattgggtttaccagcaaaggagttatac
cagatgaagtatgagctgcaggacgataccaaattctccgatataatgcgaagcagactc
tttcagcaatttctgttgaagcttaagatcaaagaggaaatgtacggcgatgaacaaaga
gtaaagatcactgttgttaaggcagacaaagtgaattattcttcagagagcagatacctg
cttgatttgattactaaatctcctagatattga
DBGET
integrated database retrieval system
