Mercurialis annua (annual mercury): 126670343
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Entry
126670343 CDS
T10153
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126670343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mean03021
]
126670343
03036 Chromosome and associated proteins [BR:
mean03036
]
126670343
Transcription machinery [BR:
mean03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126670343
Coactivators
SAGA/TFTC/STAGA complex
126670343
Chromosome and associated proteins [BR:
mean03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126670343
STAGA complex
126670343
TFTC complex
126670343
SAGA complex
126670343
SLIK complex
126670343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD_LRWD1
WD40_like
Cytochrom_D1
RAB3GAP2_N
KNTC1_N
Beta-prop_NUP159_NUP214
PROPPIN
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
126670343
NCBI-ProteinID:
XP_050220004
LinkDB
All DBs
Position
LG2:49886202..49892426
Genome browser
AA seq
672 aa
AA seq
DB search
MDEEAVVKFVETYLKKKGFKQAELAFHDEVHRNNSNSNSISIHSDPDLSHLLLTLSQSED
TPAQYSDEYGKLRSWANSSLDLYKPELLRVLYPVFVHCYMDLVAKGHIQEARIFFNNFRE
DHETLHSRDLQKLEGVLSPSHLEEMEFAHTLRQSKVNIKICQYSNELLMQYLRNTKSTMM
LGLVNEHINFQVSPGQPTLMSDDAEFVTLIGSSQDVANLVNKKEIHWGLLEDSLEERLEK
AGGLLSDSEKTEGEAKEGDMDESKKRLTEGGKQGTSNKKLKKDKATGATAKVVRPETITA
PRVKPELPLPVILTEVEQSILEDLRNRVQLSSAALPSVSFYTFINTHNSLNCSSISHDGS
LVAGGFSDSSLKVWDMAKLGQQGGSSVLQGDNAPNEHVLGPNGAKRSYTLFQGHSGPVYS
ATFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRT
ARIWSMDRIQPLRILAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGH
RSMIMSLAMSPDGRYMASADEDGTIMMWDLSSGRCVSPLMGHNSCVWTLAFSCEGSLLAS
GSADCTVKLWDVTTSTKAPRAEEIKSGSANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAG
VLSKGGQGTPVS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaggcggtagtgaaattcgtggaaacatacttgaaaaagaaagggtttaaa
caagccgagctcgcttttcacgacgaagttcaccgcaacaattcaaattcgaactcaatc
agtatccattccgatcctgatctttctcatctcctccttactctctcacagtctgaggat
actccagcacaatatagtgatgaatatggtaaattacggtcttgggcgaatagttcgctt
gatttgtataagcccgagctgctccgtgtgctttatccagtgtttgtccattgttatatg
gatcttgtagcaaaaggccatatccaagaggctagaattttcttcaataattttcgtgaa
gatcacgagacattgcactcacgagatcttcagaagttggaaggagtactttctccctcg
cacttggaggagatggaatttgctcatactcttaggcagagcaaagttaacataaagata
tgtcagtactccaatgagctcctgatgcagtatctacgtaatactaagtccactatgatg
cttgggcttgttaatgaacatattaacttccaagtttctcctggacagcctaccttaatg
tctgatgatgctgagtttgtaacactaattggaagcagccaggatgtggcgaatctggta
aataagaaagaaatacattgggggctgcttgaagattctttggaggaacgcttggagaag
gcaggaggtttgctctcagattctgaaaagacagaaggggaagccaaagagggggacatg
gatgaaagcaagaaaagattaacagaaggtggcaagcaaggcacttctaataaaaagttg
aagaaggacaaagctactggtgcaactgcaaaagttgtgcgtcctgagactatcactgca
ccacgcgtcaaaccagagcttcctttgccagtaatcctgacagaggtagaacagtctatt
cttgaggacttgaggaaccgtgtacagctaagtagtgcagcactaccatctgttagcttt
tatacatttatcaacacacataacagtttgaattgttcttcaatatcccacgatggatct
ttggtcgctgggggattctcagactcctcactgaaggtttgggatatggctaaactgggg
caacaaggtggcagttctgttttgcagggtgataatgctcccaatgaacatgtcctaggc
ccaaatggtgccaaaagatcctacacattatttcagggtcattcagggcctgtttattca
gccacttttagtcctcttggagattttattctttcctcttcagcagacacaacgattcga
ttatggagcacaaaactaaatgcgaatcttgtttgctacaagggtcataattatcctgta
tgggatgttcagtttagtcctgtagggcactattttgccagtgcttcacatgatcgaaca
gcaagaatttggtccatggatagaatacagcctttaagaatattggcaggtcacctgtct
gatgttgattgtgtacaatggcatgccaactgcaactacattgctactggatccagtgac
aaaacagttagactctgggatgtacaaagtggggaatgtgtgcggattttcattggtcac
aggagtatgattatgtcattggcaatgtctccagatggccgatatatggcatcagctgat
gaagatggcacaattatgatgtgggacctttcaagtggtcgctgtgtttcacccttgatg
ggccacaattcatgcgtatggacactagctttcagttgtgaaggttcactgctcgcatct
ggttctgctgattgtactgtgaaactatgggatgtgaccacaagcacaaaagctcccagg
gccgaagaaatcaaaagtggaagtgcaaacagattaagatcactcaaaactcttccgaca
aaatcaaccccagtatattccctgaggttctctcggaggaatcttctgtttgctgccgga
gtcctgtcaaaaggtgggcaaggtactcctgtttcatga
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