Mercurialis annua (annual mercury): 126671231
Help
Entry
126671231 CDS
T10153
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126671231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126671231
03012 Translation factors [BR:
mean03012
]
126671231
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126671231
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126671231
Translation factors [BR:
mean03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126671231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NACHT
AAA_11
ABC_tran
T2SSE
Dicer_dimer
Sigma54_activat
PhoH
Motif
Other DBs
NCBI-GeneID:
126671231
NCBI-ProteinID:
XP_050220938
LinkDB
All DBs
Position
LG3:complement(59942069..59954090)
Genome browser
AA seq
1196 aa
AA seq
DB search
MLCSSRQVPLLNTAHSKTLKPSLMKDRPPSSYGAVYVPPHQRPRSGITTPSYSESKKVVE
NRNPHYYQSAVLNLNHKNSYHLPYLQQKNNGGSDDSNGNNYKFISAYDDGVYEEGINREM
ESSTVIPGAILSDNIEEWKRKLSLLLRDKKKELISREKKDRHDFDQIAALASTMGLYSHI
YEKAVVFSKIPLPNYRFDLDNKRPQREVNIPIGLQTRINAHLGEYLSQKSKTKENFPDSF
SRSSSNGGNAADESLFELPELPASSKIVMEKILRQRSLQLRDQQHAWQNSLDGRKILEFR
ENLPAYKAKDAILTAISQNQVVIISGETGCGKTTQIPQFILESEIESDRGAFCNIICTQP
RRISAMSVSERIASERGEKLGECVGYKVRLEGVKGRDTHLLFCTTGILLRRLLVDRNLTG
ITHVFVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLDAELFSSYFGGAPTLHIP
GFTYPVRTYFLENILEMTGYRLTPSNQIDDYGQEKVWRTSKPAPRKRKSQIASAVEDALR
AADFKNYNPQTQESLSCWNPDCIGFNLIEYLLCNICENAMRGAVLVFMTGWDDINSLKDK
LQAHPILGDPSRVLLLTCHGSMASSEQRLIFDEPKDGVRKIVLATNIAETSITINDVVFV
LDCGKAKESSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHIYPRCVYDAFAEY
QLPEILRTPLQSLCLQIKSLKLGSIPEFLSRALQSPELLAVQNAIEYLKVIGALDQHENL
TVLGKYLTLFPMEPKLGKMLVVGAVFNCLDPILTVVAGLSVRDPFLTPMDKKDLAEAAKS
QFSHDYSDHLALVRAYEGWNEAERNFAGYDYCWKNFLSVQSMKVIESLRKEFSSLLKDAG
LVDNNTAISNAWSHDEPLIRAVICYGLYPGISSVVHNEKSFSLKTMEDGKVLLYSNSVNA
RDSKSPYPWLVFNEKIKVNAVFLRDSTAISDSVLLLFGGSVSKGETDGHLKMLGGYLEFF
MKPDTAEMYQTLRRELDELIQTKLLNPKMDIKSYHELLSAIRLLISEDPRDGRFVFGRQV
LKPSTVSVTVPQPALVSSTDSGPGGDNSKGKLQTLITRAGYTAPTYKTKQLKNSQFRSTV
EFNGMEIMGAPCTNKKSAEKDAAAEALQWLMGETQTGHEYINHMSMLLKKSKTAHN
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgctctgttcttctcggcaagttcctctccttaatacagcgcactccaaaaccctaaaa
ccctcactaatgaaggaccggccgccttcttcttacggcgccgtttatgttccgccacat
caacggccccgctccggcattactacaccgagctatagcgagtctaaaaaagttgttgag
aatcgtaatcctcattattatcaaagtgctgtgttgaatttaaatcataaaaatagctac
catttaccttatttacagcagaagaacaacggtgggagtgatgatagtaatggcaataat
tataagtttatttcagcttatgatgatggagtctatgaggaaggaattaatcgcgaaatg
gaatcgtctactgttatacctggtgctatcctttctgataacattgaggagtggaaacga
aagttaagtttgcttttgcgagataagaagaaagaattgatctcaagggagaaaaaggac
cgacatgattttgatcaaatagcagctctggcaagcacaatgggcttatatagccatata
tacgaaaaagctgttgtttttagtaagatcccactgccgaactacagatttgatttggat
aataagcggccgcagagggaggtgaacatacctattggtttacaaacaagaattaatgct
catcttggagaatacctctcccagaagtccaagactaaggaaaactttccagattctttt
tctagatcaagcagcaatggcggtaatgccgctgatgaatcgctttttgagctgccagag
cttcctgcatccagtaagattgtcatggaaaaaattctacggcagagaagtttgcaactg
cgtgatcagcaacatgcttggcagaattctctagatggcagaaaaatattggaatttcgg
gaaaacctccctgcttataaggcgaaggatgcaatattaacagccatttcacagaatcag
gtggttattatctcaggggaaactggttgtggtaaaaccacacaaattccccagttcata
ttagaatctgagatagaatctgaccgaggagcgttctgcaatattatatgtacgcagcca
agacgaatatctgctatgtctgtttctgaaagaattgcttccgaaaggggagagaaattg
ggtgaatgtgttggatataaagttcggcttgaaggtgtaaaaggaagagatacccacctt
ctcttttgtaccactggcattttgttaagaagattgcttgttgatagaaacttaacggga
ataactcatgtttttgtggatgagattcatgaacgtggaatgaatgaagattttttgctt
attgtccttaaggatctcctccctcgtcgtcccgaacttaggctgattctgatgagtgcc
accctcgatgcggagcttttttcttcctattttggtggagcaccaacacttcacattcca
ggatttacctatccagtgaggacttattttctagaaaatatcctggaaatgacaggctac
agattaaccccgtccaatcaaatagatgactatggtcaagaaaaggtctggagaacaagt
aaaccagctccgagaaagaggaaaagccaaattgcttctgctgtcgaggatgcactaagg
gctgctgatttcaagaattataaccctcagactcaggaatctttgtcttgttggaatcct
gattgcattggatttaatttaattgaatatcttttatgtaatatctgtgagaatgcgatg
cgtggtgctgttttagtttttatgactggttgggatgatataaattccctgaaggacaag
ctccaggctcatcccattttaggagatcctagccgagtcttgttgctcacttgccatggt
tctatggctagctcagagcagaggttaatatttgatgagcccaaagatggtgtgaggaaa
atagtgctggctactaatattgctgagacaagtatcacgatcaatgacgttgtttttgta
cttgactgtggtaaggcaaaggagtcctcatatgatgcactaaacaacactccgtgtctg
cttccttcctggatatctaaagtttctgctcaacaaaggcgaggaagagctggccgtgtt
caaccaggagaatgttaccatatctatcccagatgtgtttatgatgcttttgcagagtat
caattgccggaaatcttaaggacacctttgcaatctctttgtctgcaaattaaaagtttg
aaacttggaagtattcctgaatttctatccagggctttgcagtcacctgaattactggca
gttcaaaatgctattgaatacttgaaagtgattggggccttggatcaacatgaaaattta
actgttttaggaaaatatttgactttgtttcccatggagcctaaacttggaaagatgcta
gtagtaggtgctgtcttcaattgtctggaccccattttaacagttgttgctggtcttagt
gttagagatcctttcttgacaccaatggacaagaaggatcttgcagaggctgccaaatct
cagttttcccatgactatagtgatcatctagcccttgtccgggcatatgagggctggaac
gaagctgaaagaaattttgcagggtatgattactgctggaaaaattttctctcagtacaa
tccatgaaagttattgaatctcttcgcaaggagttctcctccttgctcaaggatgctggc
ttggttgataataacacagccatcagcaatgcatggagccatgacgagcctcttattcga
gcggttatttgctatggcctctatccaggaatttcctctgttgtgcataatgagaagtca
ttttcactgaaaactatggaagacggaaaagtgcttctttactctaactcagtcaatgcc
cgagattctaaaagtccttatccatggcttgttttcaatgagaagataaaggttaatgct
gttttccttcgggattcaacagccatatctgattcagttttgcttctttttggtggaagc
gtctccaagggtgaaactgatgggcatttaaagatgctgggaggatatctggaatttttc
atgaaacctgatacagctgaaatgtatcaaactttgaggagagaacttgatgaactgatt
cagactaaacttttgaatcccaagatggatataaagtcttatcatgagctcctctccgcc
atacgtctacttatttccgaggatccacgtgatggtagatttgtatttggtcgtcaggtc
ctgaagccctcgacagtatctgttacggtaccacaaccagctttagtttcaagcactgat
agtggacctggaggtgataattctaagggtaagctccaaacattaataaccagagccgga
tacactgcgccaacttataagacgaagcagttgaagaacagccaatttcggtctactgtg
gagttcaacggaatggaaattatgggggcaccttgtaccaacaagaagagtgcagaaaaa
gatgcagcagctgaggcgctccagtggctgatgggggagacccagacaggccatgaatac
atcaatcacatgtcgatgttattaaaaaaaagtaagactgctcataattga
DBGET
integrated database retrieval system
