Mercurialis annua (annual mercury): 126671925
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Entry
126671925 CDS
T10153
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126671925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
126671925
03009 Ribosome biogenesis [BR:
mean03009
]
126671925
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126671925
Spliceosome [BR:
mean03041
]
Complex A
U1 snRNP components
U1 related factors
126671925
Complex B
126671925
Ribosome biogenesis [BR:
mean03009
]
Eukaryotic type
Pre-60S particles
Helicases
126671925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126671925
NCBI-ProteinID:
XP_050221708
LinkDB
All DBs
Position
LG3:complement(14084935..14092314)
Genome browser
AA seq
700 aa
AA seq
DB search
MAATATATVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYEKPGGAAALSSKP
TSTPISSSIQVQQSRRAYSPVKEDDRYGRGNNGGSKPDAGTKIDQTARVGAAPSQNVSSG
MTDGYAKPSAQGYGPSAGGSSLSPEAYRRQHDISVTGDDVPPPLTSFEATGFPSELLREL
HSAGFSAPTPIQAQSWPIALRSRDIVAIAKTGSGKTLGYLIPGFMHLKRCHNDPQLGPTV
LVLSPTRELATQIQVEALKFGKSSRFSCTCLYGGAPKGPQLKELDRGVDIVVATPGRLND
ILEMRRISLSQVSYLVLDEADRMLDMGFEPQIRKIVNEVPSRRQTLMYTATWPKEVRKIA
ADLLVNPVQVNIGNADELVANKSITQHVELLAPMEKHRRLEQIIRSQEPGSKIIIFCSTK
KMCDQLARNLSRPFGAAAIHGDKSQSERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRV
VVNYDFPTGVEDYVHRIGRTGRAGAIGIAHTFFGDQDAKYASDLIKVLEGASQRVPPEIR
DMASRGGGMNKFRRWGSAPGGHDGGRGGRSDFGYGGRDGGRGSFGMSNSYSSRPDKGGRG
GYDNESRDSNGRGRSPEGWVDRSKGWSRDRSRSPNRFDKAPPTRSPVRSFHQAMMERSRA
APLLQTPRDRSRSPHFGEVEEGMIRADERGVIPDGNTHQS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaactgctactgctactgttggtccacgatatgcaccggaggatcctactcta
cccaaaccatggagaggtttagttgatggtaaaactggttacctgtatttttggaatcca
gagaccaatgtcacccagtatgaaaagcctggtggtgctgcagctctttcatctaagcca
acttcaacgcccataagctcttcaattcaagttcagcagtcacgacgtgcttatagccct
gttaaggaagatgataggtatggcagaggcaacaatggtggatcaaaacctgatgctgga
acaaagattgatcagactgcgagagtgggagcagctccatctcaaaatgtttcaagtgga
atgactgatggatatgccaagccttctgctcagggatatggtccatcagctggtggaagc
agtttgtctccagaggcgtatcgtcgtcagcatgatatttcagttaccggagatgatgtg
ccaccgccacttacttcatttgaagccactggatttccttctgagcttctgagagagtta
cacagtgcagggttctctgccccaactccaattcaggcacaatcatggcctattgctctg
cggagtagagacatagtggccattgctaagactggctcaggtaagaccttaggctactta
attcctgggtttatgcatctcaagcgctgccataatgaccctcagctgggtccaactgta
ttggtattgtcaccaacaagagagctggcaacacagatacaggttgaagctttgaaattt
gggaagtcctcaagattctcttgcacatgtttgtatggaggagcaccaaagggcccccag
ttaaaagaactagacagaggagtggatattgtggttgccactcctggccgtttgaatgac
atacttgagatgaggagaattagcctgagccaagtttcttaccttgtattggatgaggct
gatcgcatgttggacatgggttttgaaccccagattcggaagattgttaatgaagtacct
tctcgtcgccaaaccctcatgtataccgcaacttggcccaaggaagttaggaaaattgca
gcagatctgctggtcaatcctgttcaggtcaatattggcaatgctgatgagcttgtggca
aataagtcgatcacacagcatgttgaattattggcacccatggagaaacatagaaggctg
gagcagataatacggtctcaggaacctgggtcgaaaattattatcttctgttctaccaaa
aagatgtgtgatcaacttgctcgcaatctttcccgaccatttggagctgctgctattcat
ggagacaaatctcagagtgaaagggaccatgttctgaatcagttccgtacagggaggtct
ccagtgcttgtagcgactgatgttgctgctcgagggctggacataaaggacatcagagtg
gttgtcaactatgatttccccactggagtggaagattacgttcataggattggcaggaca
ggcagagcaggtgctattggaattgctcacacattctttggtgaccaagatgctaagtat
gcttcagaccttatcaaagttctggaaggggcaagccaacgtgttcctccagagattcga
gacatggcttctcgtggtggtgggatgaataagtttagacgttggggatctgcccctggt
ggacatgatggaggccgtggcggtcgtagtgattttggctatggtggaagggatggtgga
agaggtagttttggaatgtctaattcctattccagtcgtccagacaaaggtggtcgtggt
ggatatgacaatgagtcacgagacagtaatggtagaggtcgaagtccggagggttgggtt
gaccgcagtaaaggttggagccgtgatcgcagccgcagccctaataggtttgacaaagct
ccacccacacgctctcctgtgcgtagttttcatcaggcaatgatggaaagaagtcgggca
gcaccgctacttcaaactccgcgtgataggtctagatctcctcactttggggaagtggag
gaaggcatgatccgagctgatgaacgtggtgtgataccggatggaaatacccatcaatct
taa
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