Entry |
|
Name |
(RefSeq) protein PIR isoform X1
|
KO |
K05749 | cytoplasmic FMR1 interacting protein |
|
Organism |
mean Mercurialis annua (annual mercury)
|
Brite |
KEGG Orthology (KO) [BR:mean00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mean03019]
126673071
Messenger RNA biogenesis [BR:mean03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126673071
Factors involved in mRNA localization
Other mRNA localization factors
126673071
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG3:4470940..4486107
|
AA seq |
1283 aa
MAVPVEEAIAALSTFSLEDDQPEIQGAAALVSSERGATTSPVEYSDVAAYRLSLSEDTKA
LNQLDTLIQEGKGMTSVLYTYRSCVKALPQLPDSMKHSQADLYMETYQVLDLEMSRLREI
QQWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDIDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSMYFQKFSSQTRLLTLPAPHELPPREAQDYQRHYLIINHIGAI
RAEHDDFAIRFASTLNQLLLLKSTDGADSEWCKEVKGNMYDMVVEGFQLLSRWNARIWEQ
CAWKFSRPCKDAIPFESNGTSASLSDYEKVVRYNYSAEERKALVELISYIKSVGSMMHRW
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPE
ELQSHGGEDSKGNFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRKPGGLFGNSGSEIPVN
DLKQLETFFYKLSFFLHILDYSVTIATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLV
EYVLESQNAGLLESILMPFDIYNDSAQQALVILRQRFLYDEIEAEVDHCFDLFVSKLCDV
IFTYYKSWAASELLDPSFLFALDNGEKYSVQPMRFTALFKITRVKLLGRTIDLRSLIAER
MNKVFRENIEFLFDRFESQDFCAIVELERLLDILKHAHELLSQDLSLDSFSLMLNEMQEN
ISLVSFSSRLASQIWSEMQSDFLPTFVLCNTTQRFVRSSRVLHAPVQKPSMPYAKPNFYC
GTQELNSAHQAFARLHSGFFGIPHMFSVVRLLGSRSLPWLIRALLDHISNKLTTLEPLIA
GLQEALPKSIGLLPFDGGVAGCMRLVKENLNWGTKSELKVEVLRGIKEIGSVLYWMGLLD
IVLREVDTKHFMQTAPWLGLVPAADGQILHSQEGGDSPLVSIFKSSIAAIVSNPGCPNPS
SFFTMSKQAEAADLLYKANINTGSVLEYALAFTSAALDKYCTKWSAAPKTGFIDITTSKD
FYRIYSGLQIGYLEESDKQSNINHEVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLNV
AEVEAGSISQMHKNPHLAQGWDSLLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSG
APLHRIKFENTVSAFETLPQKGA |
NT seq |
3852 nt +upstreamnt +downstreamnt
atggcggttccagttgaagaagcaattgcagctctctccacattctctttagaggatgat
caaccggagattcaaggagcggcggctcttgtttcaagtgaaagaggagcaaccaccagt
cctgtagagtatagtgatgttgcagcatacagattatctctttctgaagatacaaaagct
cttaatcagctggatacacttattcaagagggaaaagggatgacatcggtgctttataca
tatcgcagctgtgtcaaagcgctacctcagcttcctgattctatgaagcacagtcaggct
gacttatacatggagacatatcaagttttagatttggagatgagtcgtttgcgtgaaatt
cagcaatggcaagcatcagctgcatctaaactagcagctgatatgcagcggttttcgagg
cctgaacgacgcattaatggccctacaataactcacctatggtccatgttgaagttactt
gatgttttggtgcaacttgatcatcttaaaaatgccaaagccagcataccaaatgacttc
tcttggtataagaggacattcacacaagtcagtattcagtggcaagacattgattcaatg
agggaggagttagatgacttacagattttcttaagcacaaggtgggccatcttgttgaac
ttgcatgttgagatgtttcgtgtaaacaatgtagaagatattcttcaggttctcatagta
tttgctgtcgagtcattagagttggattttgcacttctatttccagagagacacattctt
ctgcgtgttttacctgttcttgtcgttctagcaacatcatcagagaaagacagtgagtct
ctgtacaagagagtgaaaattaaccgattgatcaatatttttaagaatgatcctgtgatt
cctgcattcccagatcttcatctttcacctgctgcaattttgaaagaattgtctatgtac
tttcagaagttttcttcacagactcgtcttctaacccttccagcacctcatgaacttcca
ccgcgggaagcacaagactatcagagacattatctgatcatcaatcacataggagctatt
cgtgccgagcatgatgattttgcaattcgttttgcttcgaccttgaatcagctgttgttg
ttgaagtcaacagatggagcagattctgaatggtgcaaagaagtcaaaggaaatatgtat
gatatggttgttgaaggtttccagctcttaagcagatggaatgcacgcatttgggaacaa
tgtgcatggaaattttctcgtccatgcaaagatgcaattcctttcgaatccaatggaact
tctgcatcattatctgactatgagaaggtggtaagatataattatagtgcagaagaaaga
aaagctcttgttgaactcataagctacataaaaagtgtcggatcaatgatgcatcgatgg
gacacattggttgctgatgccttgtgggaaacaatacatgctgaagttcaagattttgtc
caaaacactctggccaccatgttgcggactacctttagaaagaagaaggacctttcaagg
attctttctgatatgcggactctttcagcagactggatggcaaatacaagcaagcctgaa
gaattacaatcccatggaggtgaagatagtaaagggaattttttttatcccaggccagtt
gcaccaacagctgcacaggtgcattgcttgcaattcttgatttatgaagtggtatctggc
ggtaatcttcggaagcctgggggactctttggtaatagtgggtctgagattcctgtaaat
gatttgaagcagttggagaccttcttttacaagcttagtttctttctgcacatattggac
tactctgttaccattgcaactttgacggatcttggtttcttatggtttagagaattttat
ttggagtcttctcgtgttattcagtttcccattgaatgctctcttccgtggatgttggtg
gaatacgtccttgaatcccagaatgcaggccttcttgaaagtattctgatgccatttgat
atatacaatgattcagctcagcaagcgctggttatactgaggcagcgattcctatatgac
gaaattgaagctgaggtggaccactgttttgatttgtttgtttcaaagctatgtgatgtt
attttcacatattacaagagctgggcagcaagtgaattacttgatccgtccttccttttt
gccttggacaatggagaaaagtattctgtgcagcctatgaggttcactgctctatttaaa
attactagagtaaagttgcttgggaggaccattgatttaagaagcttgattgctgaacga
atgaacaaagtgttcagagaaaatattgagtttctttttgaccgtttcgagtcccaggat
ttctgcgcaatagtggaattagagagattgctggatatcttaaagcatgctcatgagcta
ctttctcaagatctttcattggactcattcagtctcatgttaaatgagatgcaagaaaac
atatcacttgtgtcattttcaagtcgacttgcttctcagatttggtcagagatgcaaagt
gatttcttaccgacctttgttctttgcaataccactcaacgttttgtccgatcatcaaga
gttctgcatgctcctgttcaaaaaccatctatgccctatgcgaagcccaacttttattgt
ggtacacaggagttgaattctgcccatcaggctttcgctcgcttacacagtgggttcttt
ggaattccccacatgttttctgttgttagacttctgggatctagatcattgccttggctc
atccgggccctactagatcatatatcaaataagctgaccacacttgaaccattgattgcc
ggattacaagaagcattgcctaagtctattggattgcttccttttgatgggggtgtcgca
ggttgtatgaggcttgtcaaagaaaatcttaattgggggacaaaatcagagctcaaagta
gaggttcttcgagggataaaggagattggtagtgtattatactggatggggcttcttgac
attgtactgagggaagttgataccaagcattttatgcaaacagctccttggcttgggttg
gttcctgctgcggatggacaaatattgcattctcaagaaggtggagatagtcctctagtt
agtattttcaaatcatcaattgctgcaattgtatctaatcctgggtgtccaaatccgtcg
tctttcttcaccatgtcaaagcaggcagaagctgcagaccttctgtacaaggctaacatc
aataccggaagtgtgctagaatatgctctcgcttttactagtgcagctcttgataaatac
tgtaccaaatggagtgctgctcccaagacagggttcatcgacattacaacttctaaagat
ttctatcgaatttatagtggccttcaaattggatacctggaggagtctgataaacaatct
aatattaatcatgaagtgctgggtgattcggttgcctggggtggttgcactataatatac
ttgcttggccaacagctgcattttgagctttttgacttttcatatcaagtcctcaatgtt
gctgaggtagaggctggatccatctcgcaaatgcataagaatcctcatcttgctcaggga
tgggactccttactggaagcaatgaagaaagcaagaagattaaataatcatgttttctcc
atgctaaaagcgcgttgccccctagaagacaagacagcttgtgctatcaagcagagcggt
gctcctttgcatcggatcaagttcgaaaatactgtttctgcatttgaaaccctgccccaa
aagggtgcctga |