Mercurialis annua (annual mercury): 126673209
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Entry
126673209 CDS
T10153
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126673209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126673209
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126673209
mRNA degradation factors
5'-3' decay
Decapping complex
126673209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
126673209
NCBI-ProteinID:
XP_050223192
LinkDB
All DBs
Position
LG3:73282961..73287330
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AA seq
790 aa
AA seq
DB search
MESGVAIIQESPKVINLKQQNRADSSSTADGASVFDASQYAFFGEELVEEVELGGLDDED
DELLPAAAADFEHEEEEEFLFGRRDGEAVTSLSDVDDLAGTFAKLSRDVSIPRSASIIDG
RGFSQNLSTPEWAKGEDFHNYQQQLIDLEGNQGSQSGFLQQYSSSARLSELFPLRRTSTY
PEQQQLQHQQHISSEPILVPRNSHTSYPPHGGQSLQASPNHGHLNIPYLNGNFQTSPNLS
PFSSQLQLPSLQHGSPHFGGSLPQFSSALSANSRPPYQWAAHMDLRPGGHHNNLNDMLRI
PHPNGLMPPKLLQQHHNRLHHTVQPSLGDLSGMQAQLFNSHLSQSPPLTNKYEYGSMFGP
GGIRDQRMKPAPRVGQNLQYQQGPETNGRKIDFAWPRFRSKYMNTEEIDGIIRMHLAATH
GNDPYVDDYYNQGRLGKKSAGAKLRHHFCPTHLRDLPSRARANMEPHAFLQVDALGRMPF
SSIRRPRPLLEVDTPNSSISSASDQKVPEKPLEQEPMLVARVTIEDGLCLLLDVDDIDRF
LEFNQLQDGGAQLRHRRLVLLEELAVSLQLVDPLGKNRQAVGFATKDDFVFLRLASLPKG
QKLLTRYLQLLHTGGGLMLIVCMAIFRHLTFLFGNLPSDLEAAETTNALARAVSLCVQHM
DLRSLSACLAAVVCSSEHPPLRPLGSSAGNGASLILLSVLDRATELLKEFQDASNNDATN
RAQWKASFDEFFGLLFKYCINKYDEIMQSSILDPAEATKRELPVELLRASVPHTNAYQKK
MLFDLSQRSL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggagttgcaattattcaagaatctccaaaagttatcaatctcaagcaacaa
aatagagccgattcttcttctactgcagacggtgcttctgtgtttgatgcatcacaatat
gcattttttggtgaagagcttgttgaggaagttgaattagggggattagacgatgaagac
gacgagttattaccagctgcggctgctgattttgaacacgaggaagaagaggagtttctg
ttcggtagacgagatggcgaggctgtaacatctctatctgatgttgatgatcttgccggt
acatttgcaaagttgagtagagatgtcagtataccaaggagtgcatcaataattgatggt
agaggattcagccaaaatttatcaactcctgaatgggcaaagggggaggattttcataac
tatcaacagcagctcattgaccttgaagggaatcagggaagccaaagcgggttcttacag
caatattcgtcttctgctcgcctttcagaattatttcctttacgcagaacatctacatac
cctgaacagcaacaactacagcaccagcagcatatctcaagtgagccaattcttgtgcca
aggaattctcacacttcatatcctcctcatggtggacaatctttacaggcttcaccaaat
catggtcatttaaatattccataccttaatggtaatttccaaacttcaccaaatttatct
cccttttctagtcagcttcaactccctagcttgcagcatggatcaccacattttggcgga
agtttgccacaattttcttctgctctatctgcaaacagtcggcccccctaccaatgggct
gcccatatggatttacgtcctggaggtcatcacaacaacttgaatgatatgttacggatc
cctcatccaaatggtttgatgcctccaaagttgttgcagcagcatcataataggctgcac
catacagttcaaccatcattgggtgatttatctggcatgcaggctcagctatttaattct
catctttcccagtccccacctctgacaaacaagtatgagtatggttctatgtttggtccg
ggtggtattagagatcaaagaatgaaaccagccccaagagtaggacaaaatttgcagtat
caacagggtcctgaaaccaatggcaggaagattgactttgcctggcctcggtttagatcc
aagtacatgaatactgaagaaattgacggaattatcagaatgcatcttgctgcgacacat
ggtaatgatccttatgtggatgattattataaccagggccgtcttggtaaaaaatcagct
ggggcaaagctgagacatcacttttgccctactcacttgagggaccttccttctcgagct
cgtgctaacatggaaccacatgcttttctccaagttgatgctcttggtaggatgcccttt
tcttcaattcgtagaccccgtcctcttctagaagttgacactccaaattcatctattagc
agtgccagtgatcagaaagttcccgagaaaccccttgaacaggagccaatgcttgtagct
agagtgacaattgaagacggtctctgccttctccttgatgtggatgatattgaccgtttc
ctagaattcaaccagcttcaagatggcggagcccaattgagacacaggaggctggtcttg
ttggaagagctggcagtatctctgcagttggttgacccacttggcaagaatagacaagca
gttggatttgctacaaaggatgatttcgtgttcttacgactagcatctcttcccaagggt
cagaagctccttacacggtacctccagctccttcatacaggtggcggcctaatgctaatt
gtctgcatggctatttttcgtcatttgacatttctgtttggaaatcttccctctgatctt
gaagcagcagagactaccaatgctcttgcaagagcagtatcattatgtgtccagcacatg
gatctccgttcactcagtgcttgtcttgcagctgtagtttgttcctcagagcatccccca
cttcgccccctgggaagctctgccggaaatggagcttctctcattttactgtctgttctt
gacagggcaactgaactgttgaaggagtttcaagatgctagcaacaatgatgcaacaaat
agggcacaatggaaagcctcatttgacgagttctttggcctactctttaagtattgtatt
aataagtacgacgaaattatgcaatcttctatattagacccagctgaagctacaaagagg
gaattgcctgtagagcttttgcgtgctagtgtcccccacacaaacgcctaccagaagaag
atgttgtttgatctttcgcagcgttccttatag
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