Mercurialis annua (annual mercury): 126673780
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Entry
126673780 CDS
T10153
Name
(RefSeq) cleavage stimulation factor subunit 50 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126673780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126673780
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126673780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
LisH_CTF50
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_NOL10_N
DSE1_N
Cytochrom_D1
ASA1
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
126673780
NCBI-ProteinID:
XP_050223998
LinkDB
All DBs
Position
LG3:64883967..64888542
Genome browser
AA seq
440 aa
AA seq
DB search
MENKSSSLEQTLQDGKLHRHLNSLIVSHLRHSNLTQAASVVASATMTPLNVEFPPNKLLE
LVAKGLAAEKDEMLRGVNSTAMYDSGTLQPAAYGSTPAPRVTSVDFGAAHDTKGSSKNFP
KHETRHLSEHKNIARCAKFSPDGRFVATGSADTSIKLFETSKIKQMILSDARDGPVRPVI
RTFYDHIQPVNDIDFHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDTHNVRSVSFH
PSGDFVLAGTDHQLPHLYDINTFQCYLSANAPEIKINGAINQVRYSSTGGMYVTASKDGA
IRLWDGVTADCVRSIVGAHGTAEATSATFTKDQRFVLTCGKDSSVKLWEVGSGRLVKQYV
GATHTQLRCQAVFNDTEEFVLSIDEPSNEVVVWDALTAEKVARLPSNHNGAPRWIEHSPT
EAAFVSCGTDRSVRFWKETI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagagcagcagcttggagcagacactgcaagatgggaagcttcataggcac
cttaactccctcattgtttcccatcttcgtcacagtaatctcactcaggctgcaagtgta
gttgcatcagctacaatgacacctttgaatgttgaattccctcccaataaacttcttgag
ttggttgctaagggtcttgctgcagaaaaagatgagatgttaagaggggttaattctact
gcaatgtatgattcaggaacgttgcagcctgcagcatatggctcgaccccagctcctcgt
gttacgtctgttgattttggtgctgcacatgacacaaaaggctcttcaaagaattttcca
aagcatgagacccgacatctttctgaacacaagaatattgccagatgtgctaaatttagt
cctgatggaaggtttgttgccactggaagtgcggacacatcaattaagctcttcgagacc
tcaaaaatcaagcagatgatactatcagatgccagggatggccccgttcgaccagtcata
cgaacattttatgaccatatacaaccggtaaatgatatagacttccatcctcaaaacacc
gttcttatatctggagccaaggatcacacgataaaattctttgatttttccaaagctacc
gcaaagaaagcattcagggttatccaggatactcacaacgtccgttcagtgtcctttcat
ccttctggtgatttcgttcttgcaggaactgatcatcaacttccacatttgtatgatatc
aatacatttcagtgctatctatctgctaatgccccagaaatcaaaattaatggagccatt
aatcaggtgagatattcatctacgggtggcatgtatgtgacagcatctaaagatggtgct
attcggttgtgggacggggtgactgctgattgtgtgcgatccatagttggtgcacatgga
acagcagaggccacaagtgcaacatttacaaaggatcaacggtttgtcctcacttgtggc
aaggactcttcagttaagctgtgggaggttggcagtggaagattggtcaaacaatacgtc
ggagctactcatacacaattaaggtgtcaggctgttttcaatgacactgaagagtttgta
ctatccatagacgaaccaagcaacgaggttgttgtttgggatgctctaacagcggagaaa
gttgcaaggttgccgtccaaccataatggtgcaccccggtggatcgagcactcaccgaca
gaggcagcatttgtatcttgtgggactgacaggtcagtccgattctggaaagaaactatt
taa
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