Mercurialis annua (annual mercury): 126674517
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Entry
126674517 CDS
T10153
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126674517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126674517
Enzymes [BR:
mean01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
126674517
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126674517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
CbiA
AAA_22
DUF1611
ATP_bind_1
MMR_HSR1
ABC_tran
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
126674517
NCBI-ProteinID:
XP_050224930
LinkDB
All DBs
Position
LG3:9978250..9982678
Genome browser
AA seq
444 aa
AA seq
DB search
MAAYGGAAMSMSSGAPPPPPSAVKQVKLERESELRIEVANDTSLRLRLLNGTAEIFGTEL
PPEQWLTFPPRLKFAVFTWYGATIEMDGPTETDYTADETPMVSYVNVHAVLEGRRNRAKA
SSNSNASESFQGPRVIVVGPTDSGKSTLARMLVSWAAKQGWKPTFVDLDIGQGSITIPGS
IAATPIELPIDPVEGIPLEMPLVYFYGHTTPSQNVELYKALVKELAQILERQFTGNAESR
AAGMVINTMGWIEGVGYELILQAIETFSADVVLVLGQEKLFSMLRDMLRSKPNVDVVKLQ
KSGGVVSRSSKVRQRTRSYRIREYFYGISNDLSPHSNSANFSDLSVYRIGGGPQAPRSAL
PIGADPVANPLRVTAVNIDRDLLHVVLAISYAQESDEIVSSNVAGFIYVTDVDIQRRKIT
YLTPTAGELPSKNLLMGTLTWLET
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttacggcggcgcagccatgtcaatgagcagtggagcaccaccgccgccgccg
tcagctgtcaagcaagtaaaattagaaagagagagcgaattaagaatcgaagtcgccaac
gacacgtcgcttcgtctgaggttactaaacggcaccgccgagatttttggtaccgagttg
cctcctgaacagtggctcactttccctcctcgattgaaattcgcggtgtttacatggtat
ggagcaacaattgaaatggatggtcctactgaaactgattatactgctgatgagactcca
atggttagttatgttaatgttcatgctgtattagaaggacgtagaaatcgagcaaaagct
tcatcaaattctaatgcctccgagtcttttcagggtcccagagtgattgttgtggggcct
acagattccggaaaaagcaccttggcaaggatgcttgttagttgggcagctaaacaaggt
tggaaacccacgtttgtggacttggatattggccaaggatcaataacaattcctggatca
attgctgccacccctattgagttgcccattgatccagtggaaggtattcctcttgaaatg
ccacttgtgtatttctacgggcacacaactcccagccaaaatgtggagttgtataaagca
cttgttaaggagctcgctcagatactggagagacaatttactggaaatgcagaatctcgt
gctgcaggaatggtgatcaacaccatgggatggatagaaggggtgggctatgagctgatt
ctccaagcaattgaaacatttagtgctgatgttgtcttggtcttaggtcaggaaaagctt
tttagcatgcttagagatatgctaaggagcaagcccaatgtagatgttgtgaaacttcag
aagtcaggtggtgttgtttccaggagctcaaaagtccggcaaaggactagaagctatagg
atcagggaatatttttacggcatttctaatgatctctctccgcattcaaatagtgcaaat
ttcagtgacttgtctgtataccgaattggtggtgggccacaagctcccagatctgctctt
ccaattggtgccgatcctgtcgccaatcctctaagggttactgctgtgaatattgatcgt
gacttactccatgttgttcttgccatttcatatgcccaagagtccgatgaaattgtttca
agtaatgttgctgggttcatctatgtcacagacgttgacattcagaggaggaaaattacg
tatttgacgccaacggcaggagagctcccaagtaaaaatttgttaatgggaactttgaca
tggcttgaaacatga
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