Mercurialis annua (annual mercury): 126676840
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Entry
126676840 CDS
T10153
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126676840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126676840
03012 Translation factors [BR:
mean03012
]
126676840
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126676840
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126676840
Translation factors [BR:
mean03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126676840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
R3H
HA2_C
DEAD
Ank_2
HA2_N
Ank_5
nSTAND3
Ank
AAA_22
AAA_19
ATPase
AAA_7
T2SSE
AAA_16
Rad17
NACHT
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
126676840
NCBI-ProteinID:
XP_050227099
LinkDB
All DBs
Position
LG4:complement(35345755..35355941)
Genome browser
AA seq
1212 aa
AA seq
DB search
MAKKRNRGAAQHQQRQKTPNIDESTRLRIRQCLNEFRDNDDQVLTIEDDLSKNERAVVHE
VCRKMGMRSKSSGYGSARRVSVYKTANTKGTKKGKKTLTNLRISEKSKLVLHELFAYYPP
EDEELVAKVAGNYKEKNKKIRVKRDDFFKLPLMSKAFISKKVKELNSRLQNDTNLKQIVE
GKSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQYLLDYKWGKCEACKIVCTQP
RRISATSVAERISYERGQNVGDDIGYKIRLETQGGRDSSIVFCTNGVLLRLLVSRGARIS
KGEPPNETERDEVLNITHIIVDEIHERDCYSDFILAIVRDILPLYPHLRLILMSATLDAE
RFAQYFGGCPIITVPGFTYPVKSFYLEDVLSILNSEDSNHVNSATSSVPSKDHVLMGEEN
SDLDEAIKLAWTHDEFDPLLDFLFSKGTPEVYNYQDSVTGLTPLMVLAGKGRVNEVCMLL
SLSANCHLQDKDGQTALEWAKRENQLEVADIINKHIKISQTDSREQHHLLDKYLATINPD
LVDVVLIERLLRKICIDSKDGAILVFLPGWDEINKTRERLLANPFFKDSSKFLIISLHSM
VPSMEQKKVFKRPPFGCRKIILSTNIAETSITIDDVIYVIDSGRMKEKSYDPYNNVSTLQ
SSWISKASSKQREGRAGRCQPGMCYHFYSKDRAASMPDFQVPEIKRMPIEELCLQLKMLD
SNCKIEDFLQKTLDPPVPETIHNAITVLQEIGALSIDEELTELGEKLGCLPVHPLISKMI
FFAILMNCLDPALTMACVSDYRDPFTLPMLLTDKKKADNARVELASLYGGNSDQLAVIAA
FECWRTAKERGQQARLCSQYFISSSTMRMLQGMRKQLLSELTRHGFLQEDTSCYNLNAHD
PGILHSMLVAGLYPMVGRLLPPKSGKRAVVETATGAKVRLHPHSLNFKLSFKKTDSLCPL
IIFDEVTRGDGGMHIKNCTVVGPLALLLIATEIVVAPSEDSTEQRHEVGNNHHGSDVAVE
DASHEDKMEIDDKLDINSDEKIMSSPDNSVTVVADRWLYFASTALEVAQIYCLRERLAAA
ILFKVVNPRQALPPTLGASMHAIASLLSNDGQSGITLPSDPVDSLASLVHATGIDNTTPR
FDGTCHPSAFLRSLMPYTSDPPAAPHRPAAPHRPAAPVRNKPKFPVSRGNFNRKAPPAVR
APPVGSLGTIPH
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagcggaacaggggagcggcacaacatcaacaacggcagaaaacccctaat
attgatgaatccactcgtttgcgaattcgtcaatgcctaaacgaattccgtgacaacgac
gatcaagtattgacaattgaagatgacttatcgaagaatgaacgtgctgtggtacatgaa
gtatgcaggaaaatgggtatgcgttctaagagttccgggtacgggagtgcgcggcgtgtc
tctgtttacaaaactgcaaatacaaagggcaccaagaaggggaaaaaaactctaacaaat
ttgaggatttcagaaaaatcaaagttagtcttgcacgaattatttgcatactaccctcct
gaggatgaagagcttgttgcaaaagtggcgggaaattataaagagaagaataaaaaaata
cgagtgaagagagatgatttctttaagctgcctttgatgtccaaagcatttatctctaag
aaagtaaaagaactaaattctagattacaaaatgacacaaatttaaaacagattgttgaa
ggaaaatcgaagcttccaattgcatcttttagggatgttattacatccaccgtagaatct
caccaggttgttcttatttctggagaaaccggatgtggaaagactacacaggttcctcaa
tatctcttggattacaagtggggaaaatgtgaggcctgtaaaatagtttgcacgcaacct
cgtcgtatctctgcaacatcagttgctgagagaatctcgtatgaaaggggacaaaatgtc
ggagacgatattgggtacaagattcgattagaaactcaaggtggaagagactcatcaatt
gtcttctgcacaaatggggttctgctacggctgcttgtttcaaggggtgctagaatttca
aaaggggagcctcctaatgagaccgagagagatgaagttcttaatataactcacattatt
gtggatgaaattcatgaaagggactgctactcagatttcatcttggcaatcgtcagagac
atacttcctttatatcctcatcttcggctgatattgatgagtgccacacttgatgctgaa
cgatttgcacaatattttgggggctgcccaattatcaccgttcctggtttcacatatcct
gtcaaaagtttttacttagaagatgtactttccatcctaaattctgaagatagtaatcat
gttaattctgcaacgtcaagcgtcccaagtaaagaccatgtgctaatgggagaagagaat
tctgatttagatgaagctatcaaattagcttggacacatgatgaatttgatcccctcttg
gatttccttttttctaaaggaacccctgaggtttacaattaccaagattcagttactggc
ttaacaccattaatggtccttgctggaaagggaagagtaaatgaagtatgcatgcttctg
tccttaagtgcgaactgtcatttacaagacaaggatggtcaaacagcactagaatgggct
aaacgagaaaaccagcttgaagttgctgacataataaataaacatattaaaatttctcag
accgactctcgagaacaacatcatttactcgataaatatctagcaacaatcaatcccgac
cttgttgatgttgttcttatcgagcggttgttgaggaaaatttgtattgattcaaaggat
ggtgctatccttgttttccttcctggctgggatgaaataaacaagactcgagaaagatta
cttgcgaacccctttttcaaagattcttcaaagtttttgattatctctctccattctatg
gttccttctatggagcaaaagaaagtttttaaacgcccgccgttcggttgccggaaaatc
attctgtcaactaatattgctgaaacttccattacaattgacgatgttatctatgtcatt
gatagtggtcgaatgaaagaaaaaagttatgacccttataacaatgtatcaactcttcaa
tcgtcctggatctccaaagcaagttcaaagcagcgcgagggacgtgcaggtcggtgtcag
cctgggatgtgttatcatttttattctaaagatcgagcagcttctatgccagatttccaa
gttcctgaaatcaagagaatgcccattgaagaactttgtttgcaactgaagatgcttgat
tcaaattgcaaaatagaagatttcttacagaagacactggaccctcctgttcctgaaacc
atacataatgctattactgttctccaagaaattggggctttatcaatagatgaagaattg
acagaactaggagaaaagctgggttgcctccctgtacatccattgataagcaagatgatt
ttctttgctattttgatgaattgcctagatccagctttgacaatggcttgtgtctctgac
tacagagatccatttaccttgcctatgttgcttactgataaaaagaaagctgataatgct
agggtagagcttgcttcactgtatggtgggaatagtgatcagttagcagttatagcagcc
tttgaatgctggaggactgctaaagaaaggggtcaacaagcacggctttgttctcagtac
tttatctcttcaagcaccatgcgtatgctgcagggtatgcgtaagcagcttctatccgaa
cttactcggcacggattccttcaggaagacacatcttgttataatctgaatgcacatgac
cctggaattctccattctatgcttgttgctggtttgtatcctatggtggggagactcctt
ccacctaaatctggaaagcgtgctgttgtggagacagccactggtgccaaagttcggttg
caccctcattccctcaattttaagttgtcgtttaagaaaactgacagtctctgtcctttg
atcatttttgatgaagtaacccgtggtgatggtggtatgcacattaagaactgtactgtt
gttggtccgctcgccttgttactgattgcaacagagatcgttgttgccccttcagaagac
tcgactgaacaaagacatgaggtgggtaataaccaccatggaagtgatgtcgcagttgaa
gatgcaagtcatgaagataagatggaaattgatgacaagttggatataaacagtgatgag
aaaattatgtcatctcctgataattcagttactgtggttgcggatcggtggctttatttt
gcatcaacagcccttgaagttgctcaaatttactgcttgagagagcgattagcagcagct
attttattcaaagtagtgaatcctcggcaagcgcttcctcctacccttggggcctcgatg
catgcaatcgcttctcttctgtccaacgatggacaatctgggataacattaccttcagat
cccgtggattcattggcatcattggtacatgcgactgggattgacaacactactcctagg
ttcgacgggacgtgccatcctagtgcttttcttagatctctgatgccctacaccagtgat
cctcccgctgctccccatcgtcctgctgctccccatcgtcctgctgctcccgttcgcaac
aaacctaagtttcctgtatcaagaggaaattttaatagaaaagcaccaccagctgttcgt
gcaccaccggttggttcattaggcacgatcccacattaa
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