KEGG   Mercurialis annua (annual mercury): 126676964
Entry
126676964         CDS       T10153                                 
Name
(RefSeq) THO complex subunit 3-like isoform X1
  KO
K12880  THO complex subunit 3
Organism
mean  Mercurialis annua (annual mercury)
Pathway
mean03013  Nucleocytoplasmic transport
mean03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mean00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126676964
  09122 Translation
   03013 Nucleocytoplasmic transport
    126676964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mean03019]
    126676964
   03041 Spliceosome [BR:mean03041]
    126676964
Messenger RNA biogenesis [BR:mean03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     126676964
Spliceosome [BR:mean03041]
 Complex C
  Other components
   EJC/TREX
    126676964
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    126676964
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I WDR55 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 DSE1_N Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th DUF7099 Beta-prop_HPS5 PAC11 Tricorn_2nd Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_IFT80_2nd RMC1_N TRM82_WD Beta-prop_WDR41 Beta-prop_WDR11_1st Beta-prop_SCAP WD_LRWD1
Other DBs
NCBI-GeneID: 126676964
NCBI-ProteinID: XP_050227308
LinkDB
Position
LG1-X:40800278..40802710
AA seq 314 aa
MDEPKIAFKNVHSREYQGHKKKVHSVAWNCSGTKLATASTDLTARVWHIEPHAHAKMKHI
ELKGHTDNVDQLCWDPLHADLLATASTDHTVRLWDARSGKCCLQTELSGENINITYRPDG
THLAVGNRDDELTILDVRKFKPMHRRKFSYEVNEFAWTLTGDIILLTCGNGTVEVLAYPS
LQPIDRVMAHTAGCHCIAVDPKGRYFAVGSADSVVSLWDISEMLCMRTFTKLGLPVRTVS
FNYTGDYIASASREMFIDISNVQTGRSVYEIPCRAAMNSVEWNPKYNLLAYSGDDRNRYL
VDEGNFRIYGFQSS
NT seq 945 nt   +upstreamnt  +downstreamnt
atggatgaaccaaaaatcgcatttaaaaatgttcatagcagagagtaccaaggccacaaa
aagaaggtgcattcggtggcttggaattgcagtggcacaaagcttgcaactgcttctact
gatctgactgctcgtgtttggcacatcgagccgcacgctcatgctaaaatgaaacacatc
gaattgaagggtcatactgataatgtggaccagctttgttgggatcctttacatgctgat
ctcctagcaactgcatcaactgaccacactgttcgtctttgggatgctcgtagtggaaaa
tgttgtctgcagacagagcttagtggggagaatataaacatcacctacaggcctgatgga
actcacctagctgttgggaacagggatgatgagctaacgatactggatgttcgcaaattt
aagccaatgcataggcgcaaatttagttatgaggtaaatgaatttgcttggactttgaca
ggagacataatcctcttgacatgcgggaatggtaccgttgaggtgctagcatacccatcg
cttcaaccaattgacagagtcatggctcatacggctggttgtcattgcattgcagtagat
ccaaaaggaagatattttgctgttggaagtgctgattccgtagttagcctttgggatatt
tcagagatgctttgcatgcgaacatttacaaaacttggattgcctgtcaggactgtcagc
ttcaactacacaggagattatattgcttctgccagtcgagaaatgttcatcgatatatcc
aatgttcagactggccgctcagtgtatgagatcccctgtcgagctgcaatgaacagcgtg
gaatggaatcctaagtacaatttacttgcatattctggggatgacaggaacagatatctt
gttgatgaaggtaattttagaatatatggttttcaaagttcctag

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