Mercurialis annua (annual mercury): 126677312
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Entry
126677312 CDS
T10153
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126677312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126677312
03012 Translation factors [BR:
mean03012
]
126677312
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126677312
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126677312
Translation factors [BR:
mean03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126677312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
Myosin_head
FoP_duplication
ABC_tran
Rad17
T2SSE
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126677312
NCBI-ProteinID:
XP_050227825
LinkDB
All DBs
Position
LG4:complement(22454318..22463686)
Genome browser
AA seq
1037 aa
AA seq
DB search
MCLSCARSLGAHSFSFTLFSKRLSSLPNHLPSFHLPHISTQAMSQRPNFQGGRRGGRGGG
GRGGGGGRGGRGRGGGGGEQRWWDPVWRAERLRQNAAEMEVLDENEWWGKMEKMKNSGEQ
EMIFKRNYSRTDQQTLSDMAYRLNLYFHAYNKGKALVVSKIPLPDYRADLDERHGSTQKE
IHMSTETERRVGNLLNSTQRAVPENDSGASSNQGEKQPLAGPRIIKPVSTTEKDSAKEKL
SVEIKQRQDKIMASDTAKEMLSFREKLPAFKVKYEFLKAVEENQVLVISGETGCGKTTQL
PQYILEEEISRLRGADCNIMCTQPRRISAISVAARISSERGENLGETVGYQIRLEAKRSA
QTRLLFCTTGVLLRQLVQDPNLSGVSHLLVDEIHERGMNEDFLLIILHDLLPRRPDLRLI
LMSATINADLFSKYFGNAPTLHIPGLTFPVTELFLEDILEKSHYRIQSEPDNFRGNSRRG
RKKEQDLKKDPLTELYEDVNIDSEYKNYSSSTRLSLEAWSGSQLDLGLVEATIEYICRHE
GGGAILVFLTGWDEISKLLDKIKGNNLLGNQSKFLVLPLHGSMPTVNQREIFDRPPPNRR
KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR
VQAGVCYRLYPKIIHDAMPQYQLPEILRTPLQQLCLHIKSLQLGAVGPFLAKALQPPDAL
SVQNAIELLKTIGAVDDNEELTPLGRHLCTLPLDPNIGKMLLMGCVFQCLNPALTIAAAL
AHRNPFVLPIEMKNEADAAKRSFAGDSCSDHIALVKAFEGYKDAKRNRNERSFCWDNYLS
PITLRMMEDMREQFLDLLSDIGFVDKSRGAIAYNQYSHDLEMVSAILCAGLYPNVVQCKR
RGKRTAFYTKEVGKVDMHPGSVNAGVHIFPLPYMVYSEKVKTTGIYIRDSTNISDYALLL
FGGNLIPSKNGEGIEMLGDYLHFSASKSVIELIRKLRAELDKLLKRKIVEPSLDISLEGK
GVVSAVVELLHSYDVRS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctttcgtgtgcgcgctcactcggcgctcactcattttctttcactctcttttct
aaacgtctctcttcactaccaaaccacttgccttcttttcatttgccacacatctctact
caagccatgtctcaacgtcccaacttccaaggcggccggcgcggtggtcgcggcggaggg
ggacgcggtggaggaggaggacgcggcggaagaggaagaggtggaggtggtggtgagcaa
cggtggtgggatcctgtgtggcgtgctgagcgtttgagacagaatgctgctgagatggaa
gttcttgacgagaatgaatggtggggtaagatggagaaaatgaagaattcaggggagcag
gagatgatattcaagcgtaattacagtcgcactgaccagcaaaccctctctgatatggct
tatcgactgaatctttactttcatgcatacaataaagggaaggctcttgtggttagcaaa
attccattaccagattatcgggctgatcttgatgagcgccatggatccacgcagaaagag
atccacatgtctactgagactgagaggagagttggaaatcttctgaatagcacacaaaga
gcagtacctgaaaatgattcaggtgcatcatctaatcagggggagaaacaaccattagct
ggtccaaggataattaaacctgtctctaccactgagaaagattccgctaaggaaaaactt
agtgttgaaataaaacaacgtcaggataaaataatggcaagtgatactgcaaaagaaatg
ttgtcttttagggaaaagctccctgcatttaaagtgaaatacgagtttctgaaagctgtt
gaagaaaatcaggtgctagtaatttcaggagagacaggttgtggtaaaactacacagctg
cctcagtatatattagaagaggagatatcgcgccttcgaggtgctgattgcaacataatg
tgcacacaaccccgccgaatttccgccatctctgttgctgcccgaatatcttctgaaagg
ggtgagaatcttggtgaaactgttggttatcagatccgcctggaggcaaagcgctctgct
caaactcgactcttgttttgcaccactggcgttttacttcggcagttggttcaagatcct
aatttaagtggtgtgagccatttgttagtggatgaaatccatgaaagaggcatgaatgag
gactttctattaattattttgcacgaccttcttcctcggcgtccagatttacgtcttatt
ctaatgagtgcgacaataaatgctgatttgttctcaaaatactttggaaatgccccaact
cttcatataccgggattgactttccctgtaacagagttattcctagaagacatattggaa
aaatctcactatagaatccaatcagagcctgacaacttcagggggaattcacgaaggggg
aggaaaaaggagcaagatttgaagaaagatcctttaactgaattatatgaggatgttaat
attgactctgaatacaagaactacagctcatctactcggctttctcttgaagcttggtcg
ggttcacagcttgacttgggtctggtggaggcaacaattgaatacatttgtcgccatgaa
gggggtggtgctattcttgtgtttcttactggctgggatgagatttcaaagctacttgac
aaaattaaaggaaacaatcttctaggaaaccagagcaagtttctggtccttccccttcat
ggttcaatgcctactgttaaccaacgtgaaatatttgaccgccctccccctaataggcga
aaaattgttctggcaacaaatattgcagagagcagcatcactatagatgatgttgtgtat
gttgtagactgtggaaaagcaaaggaaaccagttatgatgctctaaacaaactggcctgt
ctattaccatcttggatttcaaaggcttcagcacatcagagacgaggtcgtgctggccgt
gtgcaagctggagtttgttatagattgtatccaaaaattatccatgatgcaatgcctcag
tatcagttacctgaaatactgcgaacacctctacaacagctatgcctgcacatcaaaagt
ttgcaacttggagctgtaggaccgtttttggcgaaggcacttcaaccaccagatgctctt
tctgttcaaaatgctattgaactccttaaaaccattggagctgtagatgataatgaagag
cttactcctcttggtcgccacctttgtaccctacctctggacccaaacattggaaagatg
cttctgatggggtgtgtcttccaatgcctcaatcctgctttaacaattgctgctgctctt
gcacatcgcaacccatttgttcttccaatagaaatgaaaaatgaagctgatgctgcaaag
agatcattcgccggtgattcttgcagtgaccacattgcacttgttaaagcttttgaggga
tacaaggacgcaaaacgtaatcgaaatgagcgatcattttgttgggataattacttatcc
ccaataactttgaggatgatggaggatatgagagagcaatttttggaccttctgtcagat
attggatttgttgacaaatccaggggtgctattgcttacaatcaatacagccacgacttg
gagatggtatcagcaatcctttgtgcgggactttacccaaatgttgtgcagtgcaaaaga
agagggaaacgaacagcattctacactaaagaagttgggaaagtcgatatgcatcccgga
tctgtaaatgcaggggttcatatcttccccttgccatatatggtttatagcgaaaaggtg
aaaacaaccggcatttatatccgagactctactaatatatcagattatgcactactacta
tttggtggtaatctcatccctagcaaaaatggggaaggtattgagatgctcggagattac
cttcatttttccgcatcaaagagtgttatagaattgatacggaaattgcgagctgaactg
gacaagcttctgaagaggaagattgtggaaccgagtttggacatatctttggagggaaag
ggagttgtttctgctgtggtggagttattgcacagttatgatgtacgtagctaa
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