Mercurialis annua (annual mercury): 126677396
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Entry
126677396 CDS
T10153
Name
(RefSeq) uncharacterized protein LOC126677396
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126677396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126677396
03041 Spliceosome [BR:
mean03041
]
126677396
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126677396
Spliceosome [BR:
mean03041
]
Complex B
Other components
Prp19-related factors
126677396
Complex C
126677396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_19
TPR_15
NRDE-2
ARM_TT21
PPR
TPR_5
Motif
Other DBs
NCBI-GeneID:
126677396
NCBI-ProteinID:
XP_050227941
LinkDB
All DBs
Position
LG4:complement(39217898..39220833)
Genome browser
AA seq
919 aa
AA seq
DB search
MSTLYPSEAHLQYEEEVLRAPFSVKLWWRYLVALREAPFKKRFVIYERSVKALPGSYKLW
HAYLREGLEIVSNLPIIHSQYQTLNNTFERALVTMHKMPRIWIMYLQSLTKQQLITRARK
TFDRALCALPVTQHNPIWELYLKFVSQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVTS
QLWQESAERLASVLNDDHFYSIKRKTKHTLWLELCDLLTRHAEEVSGLNVDAIIRGGISK
FTDEVGSLWTSLADYCIRTGLFEKARDIFEEGMTSVVTVRDFSVIFDAYSQFEESMVAHK
MENLDLSDEEDDSLEDEKLEDVRLEVNSKFEKTILKGFWLHDVKDVDLMLARLEYLMDRR
PELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAF
AKLYETHNDLVNARVIFDKAVQVNYKTVDNLASIWCEWTEMELRHKNFNAALELLRRATA
EPSVEVKRRVAADGNEPVQMRLHKCLRLWTFYVDMEEGLGDLESTREVYERILDLKIATP
QIVINYALLLEEEKYFEDAFKVYERGVKIFRYPHVKDLWVTYLSKFVKRYGKTKLERARE
LFEHAISMAPADAVKPLYLEYAKLEEDCGLAKRAMQVYDQSTKAVPNNEKLGMYEIYIAR
AAEIFGVPKTREIYEQAIEAGLPDKDVKAMCLKYAKLEKNLGEIDRGRAIYVFASQFADP
RSDADFWNEWHEFEVQHGNEGTFREMLRLKRSVSASYSQTHFILPEYLMQKDQRLNIDEA
KDKLKGAGVPEDEMAALERQLTAPLANNTTAKDSGRKVGFVSAGVESQTDDGVVKLNANR
EDIELPEESDSEDDETVEITQKDVPSAVFGGLGGKRREMETADDTTAAAKDNDGEGRLGA
LARLKRQRLDWLLGLSVVK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctttacccatctgaagcgcatcttcaatacgaagaagaagtcttgcgagcc
ccctttagtgtcaagctatggtggcgctacctggtggccctccgtgaagctccgttcaag
aagcggtttgtgatttatgagaggtcagttaaggctttacctggtagttataagctctgg
catgcttatcttagagagggtcttgaaattgttagcaacttacccattattcattctcaa
tatcaaaccctaaataatacatttgaaagagctttggttacgatgcataaaatgcccaga
atttggattatgtacttgcagagtttgacgaagcagcagttgattacgcgtgccaggaaa
acttttgatcgagcgctctgtgcgttgcctgttacgcagcataatcccatttgggagctg
tatttgaagtttgtgagtcaggagggtattccgattgagacttcgcttagggtttatagg
aggtacttgaagtatgatcctagtcatattgaggatttcattgagtttttggtgacttct
cagctctggcaagagtcggcggagaggctagcttcggtgttgaatgatgatcacttttat
tcgatcaaaaggaaaacgaagcatacgctgtggttagaattgtgtgatttgcttactagg
catgcggaggaggtgtctgggttaaatgtagatgctattattagaggtggtattagcaag
tttacagatgaggttggcagcttgtggacatcgcttgctgattattgtatcaggacaggg
ttgtttgagaaggcaagggatatttttgaggagggtatgactagtgtggttacagtgaga
gatttcagtgttatttttgatgcatattcacagtttgaagagagtatggttgctcataag
atggagaatttagacttgagtgatgaggaagatgattccctggaggacgagaagcttgaa
gatgttcgtttggaagtaaattccaagtttgagaaaacgatacttaaaggattttggtta
catgatgttaaagatgtagatttgatgctggcccggttggaatatctcatggacaggagg
ccagaattggctaatagtgtacttctacggcaaaatccacataatgtggaacaatggcac
aggagggttaagctttttgagggtaatccaactaagcagatactgacttataccgaggca
gtcaggacagttgatcctatgaaagcagtggggaaaccccacacattgtgggttgctttc
gctaagctgtatgaaactcacaatgatcttgtcaatgcaagggtaatttttgacaaggca
gtgcaagtgaactataaaactgtagataatctagctagcatttggtgtgaatggactgaa
atggaacttagacacaaaaacttcaatgctgcactggagctgttgagacgggccacagca
gaaccatcagttgaggtcaaacggagagttgctgctgatggcaatgaaccagtacagatg
aggctgcacaagtgccttagactctggaccttctatgtcgacatggaagagggactcgga
gacttggagtccacgcgtgaagtttatgagcggatactggaccttaaaatagccacacca
cagattgttatcaattatgctttgcttctagaagaagaaaaatattttgaagatgctttc
aaggtatatgaaaggggagtgaaaatattcagataccctcacgtgaaagacttatgggtc
acatatctttcaaagtttgtgaaaagatacgggaagacaaaattggaacgggcaagagag
ttgtttgaacatgctatcagcatggcccctgcggatgcggtgaaacctttgtaccttgaa
tatgcgaagctggaagaagactgtggtttggcaaagcgagctatgcaggtttatgatcaa
tcaactaaagctgtccctaataatgaaaagttgggaatgtatgaaatctatattgcccgt
gctgctgagatatttggtgtccccaagacaagagagatttatgagcaagccattgaggcc
gggctccccgacaaagatgtaaaagcaatgtgtttgaagtatgccaagctggaaaagaac
ttgggagaaattgatcgtgggcgtgccatatatgtatttgcatctcagtttgctgatcca
cgatctgatgccgatttctggaatgagtggcatgaattcgaggtgcaacatgggaacgag
ggcacgttccgggaaatgttgcgtttgaaacgaagtgtttctgcaagctatagccagacg
cactttatcctgccagagtatttgatgcagaaggatcaaaggctaaacattgatgaggct
aaagacaagctgaaaggagctggggtccctgaggacgaaatggctgctctagaaaggcag
ttaaccgccccgttggccaacaatacaactgcaaaagatagcggcaggaaagtcgggttt
gtaagtgctggggtagaatcccagaccgatgatggagtggtgaagcttaatgcaaaccgt
gaggacatcgaactaccagaagaaagcgactccgaagatgatgaaacagttgaaattacg
caaaaagatgttccatctgctgtctttggaggactgggtgggaagaggcgcgagatggaa
accgcagatgataccactgccgccgcaaaggacaacgatggcgaaggccgacttggtgcg
cttgccagactgaaaaggcaaagactagactggttacttggactttcagttgtgaaatag
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