Mercurialis annua (annual mercury): 126677877
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Entry
126677877 CDS
T10153
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03013
Nucleocytoplasmic transport
mean03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126677877
03015 mRNA surveillance pathway
126677877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126677877
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126677877
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126677877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
126677877
NCBI-ProteinID:
XP_050228649
LinkDB
All DBs
Position
LG4:25556109..25559960
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AA seq
502 aa
AA seq
DB search
MADANETMAAAAEKVEAKPQMAEVKRSWGDEVDSEEEQEESSKGAAADASTSDNKDVSEL
HVDNLKIEDEDFRNKELNEIDDSSIQAVTSGDTPYTSASGFDDLNLSPELLKGLYTEMKF
EKPSKIQAISLPMILTPPHKDLIAQAHNGSGKTTCFVLGMLSRVDPANPRTQALCICPTR
ELSLQNLEVLRKMGKYTGISSQCAVPMERGNNERKPLPFISAQVVIGTPGTLKKMMSLRK
LSTDGMKVLVFDEADQMLAKDGFQDDSLRIMKEIQKSSRNCQVLFFSATFNEAVKSFVSR
VAKDDANKLFVKKEELSLNAVKQYKVYCPDEQAKILVIKDRILELAEEVGQTIIFVNRRH
SASMLNKALVELGYEVTTIHGAIDVVERDRIVSEFKSGLTQVLIATDVIARGFDQQQVNV
VINYDLPIKYGTSEPDYEVYLHRIGRAGRFGRKGAIFNFLMFDSDMTAMEKIEQYFRAEA
TLIPSWQSDKDFKDALRAAGLL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctaatgagacaatggcggcggcggcggagaaagtagaagcaaagccgcaa
atggcggaggtaaagagatcatggggagatgaagtagactctgaagaagaacaagaagaa
tcgagtaaaggagcagctgccgatgcgtccacgtctgataataaagacgtatccgaatta
cacgtggataacctgaaaattgaagatgaggatttcaggaataaagagttaaatgaaatt
gatgattctagtattcaagctgttacatctggcgatacaccctatacttcagcgtctgga
ttcgatgatttaaacttatcgccagagttattgaagggactatatacggagatgaagttt
gaaaaaccaagtaaaattcaagcaattagtcttcctatgatattgactcctcctcacaaa
gacttgattgctcaggctcataatggctctggtaaaacaacctgttttgtattggggatg
ttaagtcgtgttgatcctgctaatccgagaactcaagcactttgtatttgtcccacaaga
gaactgtcccttcagaatttggaagttcttcggaaaatggggaagtacaccgggattagt
tcacaatgtgctgtgccaatggagagaggaaataatgagagaaaaccccttccgttcata
tctgcacaagttgttattggtactcctggcaccttaaagaaaatgatgtccctgagaaaa
ttgagcactgacggtatgaaagtcctcgttttcgatgaggctgatcagatgctggccaag
gacggctttcaagatgactctctgaggataatgaaggaaattcaaaaaagcagccgcaac
tgccaggttctttttttttctgccacttttaatgaggctgtgaaaagttttgtatcaagg
gttgcgaaggatgacgctaataaactctttgtgaagaaagaagagctatccttgaatgct
gtaaagcagtacaaggtctattgccctgatgagcaagctaagattttggtgataaaagac
agaattcttgaactagctgaggaagtagggcagacaattatttttgtcaatcgtagacat
agtgcaagcatgttaaacaaggcgcttgttgaattgggttatgaagtaaccaccattcat
ggtgcaattgatgttgtagagcgtgacaggatagtcagtgagtttaaaagtggtttgact
caagttctgatagcaactgatgttattgcccgagggttcgatcaacagcaggttaatgtg
gttatcaattatgatcttccaataaagtatgggacttcagagcctgattatgaggtctac
ttgcatagaattggtagggcagggcgttttggtcgtaaaggggcaatattcaactttctg
atgtttgacagcgatatgacggccatggaaaaaattgaacaatattttcgggccgaagcg
acactgattccatcgtggcagagtgataaggattttaaggatgcactgagagcagctgga
ttgctttaa
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