Mercurialis annua (annual mercury): 126677888
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Entry
126677888 CDS
T10153
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126677888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mean03400
]
126677888
Enzymes [BR:
mean01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
126677888
DNA repair and recombination proteins [BR:
mean03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
126677888
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
HeH
FANC_SAP
Motif
Other DBs
NCBI-GeneID:
126677888
NCBI-ProteinID:
XP_050228662
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Position
LG4:complement(17038682..17044193)
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AA seq
532 aa
AA seq
DB search
MNQQALLSSFRTLTNLSSFTVRSRIQLKIEQLVPLTLSLIMVSKRRSSSRSIVEDDNLYK
KKHKGLIKAEINPNSVAKENESFDIQSIKDDPSKLEKMTVQELRAMLRNVGMPAKGRKSE
LLSSLKGFVGKHLNGESSQEAEECAYSIHTEDTLLENKASNVLYETTGTVSEVSRLKHTK
KTVKESHAKDEIAKLDCQIATKEERLSIKTTKVSVGTSLQTRKKISSAENVVSMPFAEPW
TILAHKKPQKTWISYNPRTMRPPPLAEDTKSVKLMSWNVNGLRALLKLEGFSAVELAKRE
NFDVLCFQETKLQEKDVESIKQSLIDGYENSFWTCSHSKLGYSGTAIVSRVKPLSVSYGL
GIADHDSEGRLVTAEFDSFYLLNAYVPNSGDGLKRLSYRVSQWDTSLSNYMKELEKSKPV
ILTGDLNCAHQEIDIFNPAGNRRSAGFTDEERQSFETNFLSRGYVDTFRKQHPDVVGYTY
WGYRHGGRKTNKGWRLDYFLVSESIADQVHDSYIVPDVVGSDHCPIGLTLKL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaggcattgctatccagtttcagaactctcactaatctctccagttttaca
gttaggtcaagaatacagttgaagattgagcagcttgttcctttgacattgagcttaatt
atggtttctaaacgacgcagctcatcacgatcaatcgtcgaggacgataatttatataaa
aagaaacataaaggattaattaaagcagaaattaaccctaattctgttgccaaggaaaat
gaatcatttgatattcaaagtataaaggatgatccttcgaaactcgagaaaatgactgtt
caagagcttcgagcaatgttgaggaatgttggtatgcctgcgaaaggtcgtaaatcagag
cttttatcttctttaaagggctttgtgggcaagcacttgaatggtgaaagctctcaggaa
gcagaagaatgtgcatactctattcacacagaagatactttgcttgaaaacaaggccagt
aacgtactctatgaaacaacgggtacagtttcagaagtttcaagacttaaacataccaag
aaaacagtgaaagaatctcatgctaaggatgaaattgccaaacttgattgtcagattgcc
accaaagaagagaggctttcaattaaaacaactaaggtctcagttgggacgtccttacag
acaagaaaaaaaatatcatctgctgaaaatgtggtttcgatgccttttgctgaaccatgg
acaattcttgctcacaagaagcctcagaagacttggatttcatacaatccgagaaccatg
agacctccacctcttgctgaggataccaagtctgtgaaactaatgtcttggaatgtaaat
gggttaagagcattgctaaagttagagggattctcagctgtggaacttgccaaacgagaa
aattttgatgtgttgtgcttccaggagaccaaactacaggagaaggatgttgaatctatt
aaacaaagtttgatagatgggtacgagaatagtttctggacatgtagccactccaaactt
ggttactcaggcactgcaattgtctctcgggtaaagccactttctgtcagctatggtctt
ggaatagcagatcatgatagtgagggaagacttgtgactgcagaatttgattcattctat
ttattaaatgcatatgttcctaactctggagatggattgaaacggctgtcatacagggtg
tcgcagtgggatacctctcttagcaactacatgaaagagctggaaaagtctaaaccagtc
attttgaccggtgatctgaattgtgctcatcaagagatagatattttcaatcctgctgga
aatagaagaagtgctgggtttacagatgaagaaagacaatcgtttgaaacgaatttcttg
tccaggggatatgtagatacttttagaaaacaacatcctgatgttgttggctacacttac
tggggttatcgacatggtgggcggaaaactaataaagggtggcggctcgactacttcctt
gtctcagaatctatagcggaccaggttcacgactcctacattgttcctgatgttgttggt
agtgatcattgtcccataggcctcacacttaagttatag
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