Mercurialis annua (annual mercury): 126678740
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Entry
126678740 CDS
T10153
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126678740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
126678740
Spliceosome [BR:
mean03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126678740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_Aladin
NBCH_WD40
PRP4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_WDR41
eIF2A
WD40_like
PROPPIN
Tricorn_2nd
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
126678740
NCBI-ProteinID:
XP_050229595
LinkDB
All DBs
Position
LG4:complement(17853380..17856485)
Genome browser
AA seq
539 aa
AA seq
DB search
MEPEDQISSPSPLTSNLPEPVPPGVPPFIPPIAPLPIRPPPPAPPATSLNNGQSMKIDDD
SDSDNEQQQDGNGNEYIESETSKQQRERQQKALQELLMKRRAAALAVPTNDKAVRARLRR
LGEPITLFGEREMERRDRLRMLMAKLDSEGQLEKLMIAHEEDVLASVAGADEQDEMMLEY
PFFTEGSKALLDARVRIAKYSIVKAASRIQRMRRKRDDPDEDVDAEIDWVLNQAGRFALD
CSEIGDDRPLSGCSFSNDGQLLATCSLTGVAKLWSMPQVKKVSNLKGHKERATDVVFSPV
HNHVATASADRTARLWNTDGSCLRTFQGHLDRLARIAFHPTGQYLGTTSFDKTWRLWDVE
TGEELLLQEGHSRSVYGIAFHHDGSLAASGGLDALARVWDLRSGKSTIAFQGHVKPVLGI
SFSPNGYHLATGGEDNTCRIWDLRKKKSLYVIPAHSNLISQVKFEPQEGYYLVTSSYDMT
AKVWSGRDFKPVKTLSAHEAKVTSLDVGADGRYIATVSHDRTIKLWCSSSNEKEAMDED
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagatcaaatttcatctccgtcaccgttaacttcaaatctaccggaaccg
gttccaccaggagtcccaccattcattcctccgatcgcaccgctcccaatccgaccacca
ccgccagcgccaccggcaacttccctgaacaacggacaatcaatgaaaatagacgacgac
tcagattcagacaatgaacaacaacaggacggtaatggtaatgaatacatagaatcagaa
acaagcaaacagcaaagagaacgccaacagaaggcattgcaagaactattgatgaagcga
cgggcagctgcgttagctgtgccgactaacgacaaggcggttcgtgcccgtctccggaga
ctaggggaaccaattacgctgttcggagaacgggaaatggagaggcgtgataggctgcga
atgctgatggcgaaactggattcagagggacagttggagaagcttatgattgcccatgaa
gaagatgtgttagctagtgttgctggtgcggatgagcaggatgagatgatgctggagtat
ccgttttttacggaaggaagtaaggcgttgttggacgcgagggttaggattgctaagtat
agtattgttaaggctgcgtcaaggattcagaggatgaggaggaaaagggatgaccctgat
gaggatgttgatgctgagattgattgggtgttgaatcaggctgggagatttgctcttgat
tgtagtgaaattggtgatgatagacccctttctggctgttctttttcgaatgatgggcag
cttcttgctacttgttctttaactggagttgctaaattatggagcatgcctcaagtaaag
aaggtttctaacttgaagggacacaaggagcgtgcaactgatgttgtattttctcctgtg
cacaaccatgtggctactgcctcagctgatcgaacagcaaggttgtggaacactgatggt
tcatgtctcaggacattccagggccatctggatcgtcttgcccgtattgcttttcatccc
acggggcagtatttgggcactacaagctttgacaagacttggagactgtgggatgttgag
acgggagaggagttgcttctgcaagaaggtcatagccggagtgtatatgggattgcattc
caccatgatggttctttggcagcatctggcgggttagatgcacttgcgcgtgtatgggac
cttcgttctggaaagagcacaattgcttttcaaggccatgttaagccggttcttggtatt
agtttttcaccaaatggatatcatttggcgacgggaggtgaagataatacctgtcgaata
tgggatttaaggaagaaaaagtcgttatatgtcataccagcacactcaaatctaatatca
caagtgaaatttgaaccccaggagggctactacctggtcacatcatcttatgacatgact
gctaaggtttggtccggccgggattttaagcctgtcaagacattatcagcgcatgaagca
aaagttacttctttggatgttggtgcagatgggcggtatattgcaacagtctctcatgat
cgaaccatcaagctgtggtgcagcagcagtaatgaaaaagaggctatggatgaagactaa
DBGET
integrated database retrieval system
