KEGG   Mercurialis annua (annual mercury): 126680012
Entry
126680012         CDS       T10153                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
mean  Mercurialis annua (annual mercury)
Pathway
mean03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mean00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126680012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mean03021]
    126680012
Enzymes [BR:mean01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     126680012
Transcription machinery [BR:mean03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     126680012
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 126680012
NCBI-ProteinID: XP_050230997
LinkDB
Position
LG5:53974413..53979520
AA seq 1174 aa
MDFEDDSNSDSMETEISLRKINDVVGLKDFCKKAATMFFNEYGLISHQINSYNNFIHNGL
QKTLNSFGDLVVEPGYDPSKKTDNEWRHASVKFGELSLEKPSFWGGNDGSDEHNMLPRHA
RLQNMTYSSRIKVNVSVEVYVQKIVRSDKFKTGKDQYVDKEVLSTDDRTIIIGRLPVMVK
SDLCWMRTAEKGDCDFDLGGYFIIKGAEKVFIAQEQMCLKRLWVSNKQGWTVSYRSEVKR
NRLIVRLAGLSENEDSNVEKNGLNVFFMSANIPLWILFFALGVSSDKEIIDLIGHNSNDS
RIVNIYFASIRYADETCERFRKGKEALDYVNKQIRGTLFPPGESEDCFELYLFPSLRGLR
QKARFLGYMVKCLLQSYIGQRKFDNRDSFKNKRFELASELLERELRVHIAHLRRRMTKAL
QKDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGGWSHPYKKMERISGVVANLGRANPLQT
MVDLRKTRCQVQYTGKVGDARFPHPSHWGRVCFLSTPDGENCGLVKNLAATGIVSTNISE
PLIDELVSRGLEKVPDDCHSKLDDKYKVFLNGEWVGVCEESSLFVSELRRLRRRNKLHQL
VEIKRDEEQKEVRIFSDAGRILRPLLVVQNLHKIESFKGGNYTFQSLLENGIIEFVGTEE
EEDCNTAWGIERLLSGFDENQSLKYTHCELDMSLLLGLSCGIIPFANHDHARRVLYQSQK
HSQQAIGFTTTNSNIRVDTLSHQLYYPQRPLFRTMTSDCLGKPGNSRGQSVMVPKPELYN
GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKMPKLDDNV
NFGKMQSKFGRVDSLDDDGFPCIGADLQSGDIIIGKCADSGADHSMKLKHTERGMVHKIV
LSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVIN
PHAFPSRQTPGQLLEAALGKGIACGGSMKYATPFCTPSVEAITDQLHRAGFSRWGNERVY
SGRTGEMVRSLIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM
ERDCLIAHGASSNLHERLFTLSDSSQMHICQKCKNIANVIQRAVPGGRKIRGPYCRACES
VDGIVKVDVPYGAKLLSQELFSMGIGLKFETRVC
NT seq 3525 nt   +upstreamnt  +downstreamnt
atggattttgaagatgacagcaactctgattctatggaaacagaaattagtttaaggaaa
attaacgacgtggtggggttgaaagatttttgtaaaaaggcagctactatgttttttaat
gagtatggtctaattagtcatcaaattaactcatacaataattttatacacaacggctta
caaaagactttaaattcatttggtgatttggttgttgagcctggttatgatccctcaaag
aaaactgataatgaatggagacatgcatcagttaaatttggagaacttagtttggaaaaa
ccaagtttttggggcggtaatgatggttctgatgaacataatatgcttcctagacatgca
agacttcaaaatatgacttattcctctcggattaaggttaatgttagtgttgaggtctat
gtacaaaagattgttagaagtgataagtttaagacagggaaagatcagtatgttgataaa
gaagttcttagtaccgacgatcggactatcataatcgggaggttgcctgtgatggttaaa
tctgatctttgttggatgagaactgctgagaaaggtgattgtgattttgatcttggagga
tattttatcatcaagggtgctgagaaggtttttatagcacaagagcaaatgtgtttaaaa
agactttgggtttcaaataaacaagggtggacagtttcatataggtctgaggttaagagg
aatagattgattgttaggttggcggggctttcggaaaatgaagatagtaatgtagaaaag
aatggtctgaatgtgttttttatgtcagcaaacattcctctttggatactgttttttgct
cttggtgtatcgtcggataaagaaattatagatttgattggtcataattctaatgactct
aggattgtgaatatctattttgcctcaattcggtatgcggatgagacatgtgaaaggttt
cgtaagggaaaggaagctcttgattatgttaataaacaaatacgcggaactttatttcca
cctggagaatctgaagactgcttcgagttgtatttatttccaagtcttcgtggtcttagg
caaaaagctcgatttcttggctatatggtaaaatgtcttttacaatcttatattggccaa
agaaagtttgataacagggatagttttaaaaacaagagatttgagctagctagtgaatta
cttgagcgagagctcagagttcatattgcacatttaagaaggcgcatgaccaaggctctg
caaaaagacctctatggagatcgtgatgtgcgtccaattgaacattatctggatgcctcc
atagtcaccaacggtttgtctagagcgttctccactggaggatggtcacatccatacaag
aaaatggaaaggatttctggcgttgttgcaaatcttgggcgtgcaaatccattgcaaaca
atggttgatctgcggaaaacaagatgtcaggttcaatacacaggaaaggttggagatgct
agatttccgcatccatctcattggggtagagtgtgcttcctttctactccggatggtgaa
aactgtggacttgtaaagaatttggctgctactggaattgttagcacaaacatatcagaa
cctttaattgacgaattagtttctcgtggattggagaaggttcccgacgattgccattct
aagctggacgacaaatataaagtatttcttaatggggaatgggttggagtttgtgaagaa
tccagcttgtttgtttctgagcttagacgcctgcggcggaggaacaagttgcatcaactg
gtggaaatcaaaagagatgaagaacaaaaagaagtacgtatattttctgatgctggaagg
attttacgaccccttttggttgttcagaatttgcataagatagaatcatttaaagggggg
aattacacctttcaatcacttctagaaaatggaattatcgagtttgttggaactgaagag
gaagaggattgcaatactgcatggggtatcgaacgtcttttgtcgggatttgatgagaat
caatctctgaagtatactcactgtgagcttgatatgtccttattattaggcttaagttgt
ggaatcattccctttgccaatcatgaccatgcgagaagagttctctatcagtcccagaaa
cattctcaacaagctattggttttacgacaacaaattcaaatattcgagtggacactcta
tctcatcaattgtattatcctcaaaggccactttttcggacaatgacttctgattgtctt
ggaaaacctggaaactcacgaggtcagagtgtaatggtaccaaaacctgagttgtataat
ggtcaaaatgctattgttgcagtcaatgtccatctaggatacaaccaagaggattctttg
gtaatgaatcgtgcttctttagagcgtggcatgtttcgatctgaacatataagaagttat
aaggcagacgttgataataaagaattattagacaagatgccaaagcttgatgataatgta
aattttggaaagatgcaaagtaaatttggacgcgttgatagccttgacgatgatggtttt
ccttgcattggtgccgatcttcaaagtggtgatattattattggaaagtgtgctgattct
ggggctgatcacagtatgaaactgaagcatactgaaaggggcatggtacataaaattgtt
ttgtcatctaatgatgaagggaagaattttgctgtcgtgtctctgagacaggttcgttct
ccatgtcttggagacaagttttcaagcatgcatggacaaaagggtgttctgggatttctg
gagtcccaagagaacttcccttttacaagacagggaatagttcctgatatcgttataaat
ccgcatgcttttccttcacgacaaactcctggacaacttttagaggcagctttgggaaag
ggaattgcttgcggcggatcaatgaaatatgccacccctttctgcactccgtctgttgaa
gctatcacagaccagcttcacagggctggattttcaagatggggcaatgagagagtctat
agtggtcgaactggggaaatggtccgttctctcatcttcataggtccaacgttctaccag
cgattgatccacatggctgaagacaaagtaaaattccgcaacaccgggcctgtccaccca
ctcacgagacaaccagttgcagatcgcaagcgattcggtggcatcaagtttggtgagatg
gagcgcgactgcctcatagctcacggtgcatcttccaatctgcatgagcgcctttttact
ctcagcgattcttcacagatgcacatctgccagaaatgcaagaatatagcaaatgtaatt
cagcgtgcagtgcctgggggtcgcaagattcggggtccctattgccgagcttgcgagtca
gttgatggaattgtgaaggttgatgtaccttatggggcaaagttattgagccaggagctt
ttcagcatgggcatcggtttgaagtttgaaactcgggtttgctga

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