Mercurialis annua (annual mercury): 126680905
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Entry
126680905 CDS
T10153
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126680905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126680905
03012 Translation factors [BR:
mean03012
]
126680905
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126680905
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126680905
Translation factors [BR:
mean03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126680905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
nSTAND3
AAA_19
T2SSE
NACHT
ATPase
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
126680905
NCBI-ProteinID:
XP_050232144
LinkDB
All DBs
Position
LG5:14497078..14513285
Genome browser
AA seq
1182 aa
AA seq
DB search
MSCYSSIFQGSIRTSPVMLRTSFALRSCKTLKQQKQHSLFSLASLFSTTNHRQTLASRLV
LLNYKRQRADRGSASVGVLPYLSLQNLNYGRFAYQDVSSDDSDREIGSNSQGKSQSGSTL
DNIEDWKWKLTMLLRNKDEQEVVSREKKDRRDFDQLSALATRMGLHSRQYSRVVVFSKVP
LPNYRPDLDDKRPQREVILPFGLQREVDYHLNAYVSKKSMNSGGLSANVLSRSSGKKSMF
TTDGLYGQPESSTQNNVVMEKILRRKSLQLRAQQLEWQESSEGQKMAEFRQSLPAYKERE
SLLKVISENQVVVVSGETGCGKTTQLPQYILESEIDAARGAACSIICTQPRRISAMSVSE
RVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIH
ERGMNEDFLLIVLRDLLPRRPELRLILMSATLNAELFSSYFGGAPTIHIPGFTFPVRAQF
LEDILEITGHRLTPYNQIDDYGQEKVWKMQKQAQSFKKRKSQIASAVEDALEVSNFRGYS
FSTQDSLSSWNPDSIGFNLIERTLYHIVKKERPGAVLVFMTGWDDINSLKDQLQTNPVLG
DPSRVLLLACHGSMASSEQRLIFDKPVDGVRKIVLATNMAETSITIPDVVFVVDCGKAKE
TSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECFHLYPRCVYDAFSDYQLPELLRT
PLQSLCLHIKSLQLGSISDFLSRALQPPEPLSVQNAVEYLKLIGALDEDENLTVLGRHLS
VLPVEPKLGKMLILGAIFNCLGPIMTVVAGLSVRDPFLMPHDKKDLAESAKVQFSARDYS
DHLVLVRAYDGWKDAERQQSGYEYCWKNFLSAQTMRAIDSLRKQFFCLLKDTGLIDHKTE
DCSTWSHDAHLVQALICAGLFPGICSVVNKEKSITLKTMEDGQVLLYSNSVNAGIPKIPY
PWLVFNEKVKVNSVFLRDSTGVSDSVLLLFGGDLSRGGLDGHLKMLGGYLEFFMKPELAD
TYLGLKRELEELIQKKLLDPNVDIQCHNELLTAIRLLVSEDKCEGRFVFGRQLPASSKKM
NKDGSSGKLLSDKSKNELQTVLVRAGHDTPTYKTKQLKNNQFRSTVIFNGLNFVGQPCSS
KKFAEKDAAAEALLWLKGEVHSSSRDINHVSTLLKKSRRKMR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgctactcatcaatttttcaaggttcaattagaacctccccggtgatgttgaga
acttcatttgctctccgctcatgtaaaaccctaaagcagcagaaacagcactctttattt
tcattagcttctttgtttagtacgactaatcatcgccaaaccctagcttctaggcttgtt
ttattgaattataagcgtcagagagctgacaggggttctgcttctgttggggttttgcct
tatttgtccctgcagaacttgaattatgggcgttttgcctatcaggatgtttctagtgac
gattctgatcgtgaaattggctcgaattcgcaggggaaatcgcagagtggttccaccctt
gataacatcgaggattggaaatggaagttaaccatgctacttcggaacaaggatgagcaa
gaagttgtctcgagggagaaaaaagacaggcgggatttcgaccagctttcagcattggca
actcggatgggcttgcatagtcgtcagtactcaagagttgttgtctttagtaaagtgccg
ctgccaaattacagacctgatctggatgacaagcgtcctcagagagaggtgatcttgcct
tttgggctgcaaagagaagtagattaccatctcaatgcttacgtttccaaaaagtccatg
aacagtggaggtttgtctgcaaatgttctgtcacgatcaagcggcaagaaaagcatgttt
actactgatggactctatgggcagccagaatcctcgacacaaaacaatgttgtcatggaa
aaaattctaaggcggaaaagtttgcagctacgtgctcagcaactagagtggcaggaatct
tcagagggtcaaaagatggctgaatttcgccaaagtcttcctgcatataaagaaagggag
tcattactaaaagttatatctgaaaatcaggtggttgttgtctcgggtgaaacgggttgt
ggtaaaaccacacaactcccacaatacatactagagtcagagattgatgcagctcgtgga
gctgcctgcagtatcatatgtacacagccccgaagaatatcagctatgtcagtgtctgaa
agagttgctgcagaacgaggggaaaaactgggagaatcagttggatataaagttcggctg
gagggaatcaaaggaagggacactcgccttttgttttgcaccactggcatattattgagg
agattactagttgacagaaatttgaaaggtgtaacacatgttatagttgatgagattcat
gaacgtggaatgaatgaagatttccttcttattgtcctgagagatctccttcctcgtaga
ccggagctgaggttgattttgatgagtgcaaccttaaatgctgagctgttctcttcctat
tttggcggtgctccaacaattcatattccaggttttacatttcctgttcgagcacaattt
ctagaggacattctagaaataactggacacaggttgactccatataatcaaatcgatgat
tatggtcaagaaaaggtttggaaaatgcagaaacaagctcaatctttcaaaaagaggaag
agccagattgcttctgctgttgaggatgcccttgaggtctccaactttaggggatatagt
tttagtacccaggactctttatcgtcttggaacccagactcaattggtttcaacctcatt
gagcgcacactttatcacattgttaagaaagaaagacctggggcggtattggtatttatg
actggctgggatgacattaattctttgaaggatcagctacaaactaatcctgtcttgggt
gatcctagccgagtactgttacttgcatgccatggttctatggccagctctgagcagagg
ttaatatttgacaagcctgttgatggagtgcgaaaaattgttctggctactaatatggcg
gagactagcattaccattcctgatgtggtctttgtggtggactgtggaaaggcgaaagaa
acatcatatgatgcactaaacaatactccatgtttgcttccttcatggatctcaaaagca
gcagctcggcaaagaagaggaagagctggtcgcgttcaacccggcgagtgttttcatctt
tatcctagatgtgtatatgatgctttttctgactatcaacttcccgaacttttaaggaca
ccattgcaatctttgtgcttgcatattaaaagtctccagcttggtagtatttcagacttc
ctctctagagcattacagcctccagaacctctatcggttcaaaatgctgttgagtatttg
aaactgataggagctctggatgaggatgaaaatctcacagttctaggacgtcacttgtct
gtgcttccagttgagcctaagcttggcaaaatgctcatcttaggggccattttcaactgt
ctgggtccgataatgactgttgttgctggtcttagtgtaagagatccattcctgatgcca
catgacaagaaggatcttgcagagtctgcaaaagtacagttctctgctagggattacagt
gaccatcttgttcttgtccgagcatatgatggttggaaagatgctgaaagacaacaatct
ggttatgagtactgttggaaaaattttctttctgcacaaactatgagagccattgactct
cttcgaaagcagttcttttgtttgctcaaagatactggtctcattgatcataaaacagag
gactgcagtacgtggagccatgatgcacatcttgttcaagctctcatctgtgctggtttg
tttcctgggatctgctcggttgtgaacaaggagaagtcaataacattgaaaacaatggag
gatggtcaggtgcttctgtactcgaattctgttaatgctggcatacccaaaattccttac
ccgtggttagtttttaatgagaaagtaaaagtgaattcagtctttctgcgtgattcaact
ggggtatccgactctgtgttgctgttatttggtggagacctatcaagaggtggactagat
ggacacctgaaaatgttgggaggatacttggaattttttatgaaacctgagttggcagat
acatatctaggcttaaaaagagagcttgaggagctaattcagaagaaacttctggacccc
aatgtggatattcaatgtcacaatgagctcttgacggcaataagattattggtatcagag
gataaatgtgagggtagattcgtatttggtcgccagctgccagcatcatcaaagaagatg
aataaagatggttcatctggcaaactgctaagtgacaaatctaaaaatgagttgcaaact
gttcttgtcagggcagggcatgacactcccacctataagacaaaacaactaaaaaacaac
cagtttcgctccactgtaatctttaatggactgaactttgtagggcagccttgcagtagt
aagaaatttgcagaaaaggatgcagctgctgaggctcttctatggttaaagggtgaggtg
cattcatcttctagagatattaaccatgtttccacacttttgaaaaagagtagaagaaaa
atgagataa
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integrated database retrieval system
