Mercurialis annua (annual mercury): 126681283
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Entry
126681283 CDS
T10153
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126681283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
126681283
Spliceosome [BR:
mean03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126681283
Complex C
U5 SnRNP specific factors
126681283
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
126681283
NCBI-ProteinID:
XP_050232754
LinkDB
All DBs
Position
LG5:complement(8191453..8202850)
Genome browser
AA seq
2389 aa
AA seq
DB search
MWNSNAGEPPIMPPGTGGPSIPPPQMPAQPSYTVLAPQGQAPPPQTPADAEARLEEKARK
WQQLNTKRYSDKRKFGFVETQKEDMPPEHARKIIRDHGDMSSKKYRHDKRVYLGALKFIP
HAVYKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGSMWIMMRREKR
DRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKT
KLINGPSYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGP
KFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMI
MYIKAEDPDLPAFYYDPLIHPITSTNKERREKKVHDDDDDEDFLLPEGVEPFLQDTQLYT
DTTAAGISLLLAPRPFNMRSGRMRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFV
LNELHHRPPKAQKKKHLFRSLGATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNY
LHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLA
DGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWR
VWLFFLRGIVPLLERWLGNLLARQFEGRHSKGTAKTVTKQRVESHFDLELRAAVMHDVLD
AMPGDNFLHLILYFDVCCVLYLYLTCSNKISEGIKQNKARTILQHLSEAWRCWKANIPWK
VPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAE
QERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLK
ESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSSLIP
VYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWD
TSDGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNS
YGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPNQPNEFITYWDTKVETRHPIRL
YSRYIDRVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYQNKKCWPRDARMRLMKHDV
NLGRSVFWDMRNRLPRSITTLDWDNSFVSAYSKDNPNLLFSMCGFEVRILPKIRMTQEAF
SNTKDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTA
LIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLG
MLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVW
AEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ
VLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKA
SGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKI
PTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSC
ADVLLFAAHRWPMSKPSLVAESKDLFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMD
YTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRER
IRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGA
IFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRK
GMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKS
ISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIITEQHHIWPSLNDDQWMKVEVALRDL
ILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKESNQLTAVTTRT
TNVHGDELIVTTTSPYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIM
PKNILKKFICIADLRTQIAGYLYGISPPDNPQVKEIRCIVMPPQWGTHQQVNLPSALPEH
DFLGDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLT
AYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVADNGPWNYNFMGV
KHQTSMKYGIKLGPPREYYHEDHRPTHYLEFSNLEEGDIAEGDREDTFT
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacagcaacgctggagaaccgccgataatgccgccgggaaccggcggtccttcc
ataccaccgcctcagatgccggcgcaaccttcttacacagtccttgcgccgcaaggacaa
gcgccaccgcctcagacgccggcagatgcggaggcgaggttagaagagaaggcaaggaaa
tggcagcagcttaatacgaagaggtatagtgataagaggaagtttggattcgttgagact
cagaaggaggatatgccgcccgaacatgccaggaagatcataagagatcatggggacatg
tcctctaagaaatatcgtcatgataaacgtgtgtatctcggggcccttaaattcattcct
catgctgtttataagcttcttgaaaatatgcctatgccatgggagcaggttcgtgatgtg
aaggttctgtatcatataactggagctatcacttttgtaaatgaaattccatgggttgtt
gagcctatttacttagctcagtggggttcaatgtggatcatgatgcgaagagagaagagg
gatcgacggcattttaagaggatgaggtttccaccatttgatgatgaggaacctccattg
gactatgcggacaatttgttagacgttgatcctttagagcctattcaactagagttggat
gaagaagaagattctgcagtgtacacctggttttatgatcacaagccccttgtgaaaaca
aagcttattaatggtccaagctacaggaaatggcatctctctcttcccattatggcaact
cttcaccggttggcagggcagctcctctctgatctaattgaccgcaattatttttaccta
tttgacatggagtccttcttcacagcaaaagctttgaacatgtgtattcctggtgggccc
aagtttgaacctttatatcgtgatatggagaagggggatgaagattggaatgagtttaat
gatataaacaaactcatcattcggtcacctcttaggacagagtatagaattgcatttcct
catctatataacaacaggcccaggaaagtgaaactttgtgtgtatcacacacccatgatc
atgtacattaaagctgaggatccggatttacccgctttctattatgatccactgatacat
cctataacctccacgaacaaggaacgtcgtgaaaagaaggttcatgatgacgatgacgat
gaagatttccttttacctgaaggagtggaaccttttttgcaagatactcagctttataca
gataccacagctgctggcatttcattgttacttgcaccacggccttttaacatgagatct
ggtcggatgcgacgcgcagaagatataccccttgtatcggagtggtataaggagcattgt
ccaccgtcatatccagtaaaagttagagtcagctatcaaaaactgctgaaatgttttgtt
ttgaatgagctgcatcatcgaccacctaaagcgcaaaagaaaaagcacctgtttcgctct
ctaggtgcaaccaagttcttccagaccacagaacttgattgggctgaagcaggattgcaa
gtttgtaagcagggttataacatgctgaatctgttgatacataggaaaaatttgaattac
cttcatcttgattataatttcaacttgaagcctgttaaaaccttaactacaaaggaacgc
aagaagtcacgatttggcaatgcttttcatctatgccgtgagatcttgcgtttgacgaag
cttgtagttgatgccaatattcagttccgattgggtaatgttgatgccttccaacttgct
gatggtctgcaatatattttctctcatgttggccagttgactggcatgtaccgttacaaa
tataggctgatgcgacagattagaatgtgcaaggatctgaagcatttgatatattaccgc
ttcaatactggtccagtgggaaaaggacctggctgtggattctgggcaccaatgtggagg
gtgtggctatttttcctccgtgggattgtgcctcttctagaacggtggttagggaatctt
cttgctcgccagtttgaagggcgtcactcaaaaggaactgctaagacagtgacaaagcaa
cgtgtggaaagtcattttgacttggagcttcgtgctgctgtcatgcacgatgttcttgat
gccatgccaggtgataactttttacatttgattctttactttgatgtttgttgtgtttta
tatctgtacttaacgtgtagtaataaaatttcagagggcatcaaacagaataaagctaga
accatattgcagcatcttagtgaggcttggcgttgttggaaggcgaacattccatggaaa
gtgcctggattgccagttcctattgaaaacatgattcttcgttatgtgaaatctaaagca
gattggtggacaaatgttgctcactataatcgtgagcgtataagaagaggtgcgacggtt
gataagacagtttgtaggaagaatctaggaaggttgactcgcctttggctaaaggcagaa
caggaacgtcagcacaattacttgaaagatggtccatatgttaccccggaggaagcagtt
gccatttacaccacaacagtgcattggctggaatccagaaagttctctcctattccattt
cctccgttatcatacaagcatgacaccaagctactcatacttgctttggaaagattgaaa
gaatcatatagtgtagctgtgagattaaaccaactacagagggaagagctaggccttatt
gaacaagcttatgataatccacatgaggctctatccaggattaagcgtcatctgcttacg
caacgtgcatttaaagaagtcggcatagagttcatggatttatatagttctttgattcca
gtatatgaaatagaacctcttgaaaaaataacagatgcttacctcgaccaatatctatgg
tatgaaggtgacaagcgccatctctttccaaactggattaagcctgcagattctgagccg
ccaccactgcttgtatataaatggtgtcaaggtataaacaatttgcagggtatttgggac
acaagtgatggacaatgtgtggttatgcttcaaacaaagtttgagaagttctttgaaaag
attgacttgacaatgcttaacaggcttcttcgtttggttcttgatcacaacattgctgat
tatgtcactgcaaagaacaatgttgtgttgtcctacaaagatatgagtcacacaaactca
tatggtttgatacgtggtctacagtttgcatcgtttgttgtacagtattacggacttgtg
cttgatctcttgcttcttggattgacccgggccagcgagattgctggtccaccaaatcaa
ccaaacgaattcatcacatattgggatacgaaagttgagacaagacaccctataaggcta
tattctaggtacattgacagggtgcatatattgttccgtttcactcatgaagaggcccga
gatctcattcagcggtatcttactgagcatcctgatcccaacaatgaaaatatggttgga
taccagaacaagaaatgctggccaagagatgcaagaatgagactcatgaaacatgatgtt
aatcttgggagaagtgtattctgggatatgaggaatcgtcttccccgaagcataactaca
ttggattgggataacagctttgtttctgcttacagcaaggacaatccaaacttgcttttc
agcatgtgtggctttgaagttcgaatacttcctaaaataaggatgactcaggaagcattt
agcaatacaaaggatggagtatggaatttgcagaatgagcagacaaaggaacggactgca
gttgctttcctacgggttgacgatgaacacatgaaggtgtttgaaaaccgtgtgaggcag
attcttatgtcttcaggatcaactacgttcacaaaaattgtgaacaaatggaatacagcc
ctgataggtctaatgacttatttccgtgaagcgactgtgcatacacaagagctgttagat
ttgcttgttaaatgtgaaaacaaaattcaaactcgtatcaagattggtttgaactcaaaa
atgcctagccgatttcctcctgttatattctatactcccaaagaaataggaggacttgga
atgctttcaatgggtcacatattgatcccacaaagtgacctacgatacagccagcaaacg
gatgttggtgtaacccatttcaggagtggaatgagtcatgaggaggaccagctgattcca
aatctttatcgctacattcagccctgggagagtgagttcatagattcacagcgtgtctgg
gcagagtatgctcttaagcggcaggaagcacaggcgcaaaacaggcgtttaacacttgaa
gatttggaagattcatgggatagggggattccacgcattaatactttatttcagaaggat
cgtcacactctagcatatgacaaaggatggagagtgcgtacagatttcaagcaatatcag
gttctaaaacaaaatcctttctggtggacacaccagaggcatgatgggaaactttggaac
ttgaacaattaccgtacagatgttatccaagctcttggtggtgttgagggaattcttgag
catacgctgtttaaaggaacatattttcctacctgggaaggtctgttttgggagaaggca
tctggttttgaagagtcaatgaagtacaagaagcttaccaatgcacagagatctggtctg
aatcaaattcccaatagaaggtttactctttggtggtcacccacgataaatcgtgcaaat
gtttatgtgggtttccaggtgcagttggacttaactggtatctttatgcatggaaagatt
ccaaccttaaagatctcattgattcagatattccgagcccacttgtggcagaagattcat
gagagtgttgttatggatttgtgtcaagtcttagatcaggagctggatgctctggaaatt
gaaactgtgcagaaagaaacaatccatccaaggaagagttacaagatgaacagctcctgc
gcagacgttctcttgtttgctgctcataggtggcctatgtcaaagcccagtctcgtagcc
gagtcaaaagatttgtttgatcagaaggccagcaataaatactggatagatgtacaactt
cgatggggtgactacgactctcacgatattgagcgttatacccgtgccaagtttatggat
tacacaacagataacatgtctatttatccatctcctacaggggtgatgattggtcttgat
ctggcatacaatttgcactctgcatttggcaactggttccctggatcaaagccactgcta
gctcaggcaatgaataagataatgaagtcgaacccagctttatatgttttgagggagagg
ataaggaaaggtttgcagttgtattcttctgagcctacagaaccatatttgtcatctcag
aactatggcgagatctttagcaatcagatcatttggtttgttgacgacaccaatgtgtat
cgtgtcacgattcacaagacattcgagggaaaccttaccacaaaacctatcaatggtgca
atttttatttttaatcctaggactggtcagctgtttctgaaggtcatccacactagtgta
tgggcaggacagaagcgtcttggtcaactagctaagtggaagactgcggaagaagttgct
gctcttgtgcgttctctacctgttgaagagcaaccgaaacagattatcgtgactcgtaaa
ggaatgcttgatccgttggaggttcacttacttgatttcccaaatatagttattaaagga
agtgagttgcagttgccattccaggcgtgcttgaagatagagaaatttggtgatttgata
ttgaaggcaacagagccacaaatggtgttgttcaacatttatgatgactggctgaagagt
atctcatcatacactgcattttctcgactcattttgattctccgtgcccttcatgtgaac
aatgagaaggcaaaaatgcttttaaagcctgacaaaaccataatcactgagcaacaccac
atctggccttctctgaatgatgatcaatggatgaaggttgaggttgctttaagagatctc
attctttctgattatgccaagaagaacaatgtcaatacatcagccctgacacaatctgaa
attcgtgatattattcttggagctgagatcacgcctccatctcaacaaaggcaacagata
gcagaaattgagaagcaggctaaagaatcaaatcaactgacagctgtcacgacaagaact
acgaatgtgcatggtgatgaactgattgtgacaactacaagtccctatgaacaggctgcc
tttggctctaaaacggattggcgtgtgagagcaatctcagccacaaatctgtaccttagg
gttaatcatatatatgtcaattcagaggatatcaaagaaactggatatacatatatcatg
cccaaaaacatcttgaagaaatttatctgcatagcagatttacgaacacaaattgctggg
tacttgtatggtataagtcccccagataaccctcaggttaaggaaatccgctgtattgtc
atgccgccacagtgggggacacatcaacaagttaatcttccatcagccttgccggaacat
gatttccttggtgatttggagcctctgggatggatgcatacccaaccaaatgagcttcct
cagttgtccccacaggatcttacttctcatgctcggattttggagaacaacaagcagtgg
gatggtgagaagtgtatcatcttgacctgcagtttcactcctggatcatgctcgctaact
gcatataagcttaccccaagtggatatgaatggggacgtgtcaacaaggacactggaagc
aatcctcatggttacttaccaactcattatgagaaggtccagatgctgttgagtgaccgc
ttccttggtttctacatggttgcggataatggcccatggaactataacttcatgggagta
aagcatcaaacaagcatgaagtacggaatcaagctgggcccacctcgggagtactatcac
gaggaccatagaccaactcattatttggagttcagcaacttggaggaaggtgatattgct
gagggcgaccgtgaagatacattcacttga
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