Mercurialis annua (annual mercury): 126681323
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Entry
126681323 CDS
T10153
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126681323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126681323
04121 Ubiquitin system [BR:
mean04121
]
126681323
03036 Chromosome and associated proteins [BR:
mean03036
]
126681323
03400 DNA repair and recombination proteins [BR:
mean03400
]
126681323
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126681323
Ubiquitin system [BR:
mean04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126681323
Chromosome and associated proteins [BR:
mean03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
126681323
DNA repair and recombination proteins [BR:
mean03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
126681323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-HC5HC2H_2
zf-C3HC4_4
zf-RING_5
zf-RING_10
zf-rbx1
PHD_NSD
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
126681323
NCBI-ProteinID:
XP_050232818
LinkDB
All DBs
Position
LG5:complement(52370675..52376433)
Genome browser
AA seq
1032 aa
AA seq
DB search
MADPTHLEKMGRELKCSICLSLLNSAVSLTCNHAFCNSCIVKSMKSGSNCPVCKVPYQRR
EVRAAPHMDNLVSIYKSMEAASGFQIFVTQNPPSTKLFDEGKQVECETGAGQDKAESQRM
SNGKASRKKNKASMEVSDDSAAKPSFPAKKRVQVPQCLPEETPTRPKKLEIKSTENSKYG
FKNSSRPQKENAGPNGNSEPVLSPFFWLRDDEDIEKLSQRSAGSQFLDITPPHVPAFSDI
KDSDDECPSQLFPAEEVRGKSNDADLFDSEMFEWTQQACSPELYSTPASSTKMQDDNAVG
IEENQESRRDAPLQNSNANEQGIKKVRCLNSEHRMTTSDEELYTSSIQRAKGTKNETRND
KFNKRGRTVRKAALKKCAKRDAEHDLQAPYNSKEKSEKSIQNEARENRGPSLSFKKSKRG
KKTVRGTSATQHEPVLSSSLRGESLNPCDQMLDVELSSSLGKKVCDAKYPKRNTGKMCDK
ATTSDGTSCSLRSKKRKVESFINNIEEIETIRNQQGEDASISKVDGKNTLDTNKKRQIHR
KEFNPILRLDSNKKVREKKMKVSFLGISEDGVQNDHQEGKNNISAKETQLLERVTDVFTN
KAQSNEEVQIRPGSGIVNHSVMLKKLDQANGVVLQSCQTLPQKVQCAFCLSSDDSKASGE
MVHFCNGKPVAASYEGGLKVIHSHRSCAEWAPNVYFEGDTAINLEAELTRSKRIRCGCCG
LKGAALGCYEKSCHKSFHVTCAKMTPQCRWDTENFVMLCPLHASSKLPIEDSATTKRIRK
KCVPKRQKSNQSNQKQDVSTCSSWNSSETAYKLVICCSALTIEEKGIVSEFQRLSGLTVL
KNWDTSVTHVIASTDENGACRRTLKILMGILEGKWILNIEWVKACMKATKPVLEDPFEIL
VDIHGMRDGPQLGRLRILNKQPKIFEGLKFYFIGDFVASYKGYIQDLIVAGGGTILHRKP
LPGAEADRSPSTFIIYSIELPDKCDTKNKGMVILNQRRADAEAMASATGAKAVNNSWILN
SIAACRLQNFTE
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaactcatctggagaaaatgggcagagagctcaaatgctccatctgcttg
agtttacttaattctgctgtctcacttacatgtaatcatgcattttgcaattcttgtatc
gttaaatcgatgaaatcaggttcgaattgtccggtgtgtaaagttccgtatcagcgtaga
gaggttcgagctgctccgcacatggataacttagtaagcatttacaaaagtatggaagct
gcttcaggattccagatttttgttactcagaatccaccatctactaaattatttgatgaa
gggaaacaagtggaatgtgaaaccggggcaggtcaggacaaagcggagagtcaaagaatg
tccaatggaaaagcatcaagaaaaaaaaataaagccagcatggaggtttctgatgacagt
gctgcaaaaccttccttcccagctaagaaaagagttcaagtgcctcaatgtctgcctgaa
gaaaccccaacacggcctaagaagttagaaatcaaatcaactgaaaacagcaagtatggg
tttaagaatagttcacggccccaaaaggagaatgctggtcccaatggaaacagtgaacct
gtgctttctccattcttctggttgagagatgatgaagacatagagaagttaagtcagcgt
tctgcaggcagtcaatttttggacataacacctcctcatgttcctgcatttagtgatatt
aaggactcagatgatgaatgtccctctcaattattcccagctgaggaagtgcgtggtaaa
tcaaatgatgcagatctttttgacagtgaaatgtttgaatggacacaacaagcttgttcc
ccagaactttattcaactcctgcgagttcgactaagatgcaggatgataatgctgttggc
atagaagaaaatcaagaaagcagacgagatgcaccattacagaattcaaatgcaaatgaa
cagggtatcaaaaaggtcagatgcttgaattctgaacatagaatgaccacttcagacgag
gaattgtatacatcatctattcagagagccaaaggtactaaaaatgaaactaggaacgat
aagttcaacaagagaggtcggactgtcagaaaagctgcgctgaagaagtgtgctaagaga
gatgcagaacatgatcttcaggctccttataattcaaaggaaaaatccgaaaaaagcata
caaaatgaagcacgcgaaaataggggcccctctttaagcttcaagaaatctaagagagga
aagaagactgtacgtggtacctctgcaactcaacatgaacctgttctttcttcttctctt
agaggagaatcactgaacccctgtgaccaaatgcttgatgtcgagttgtcttcttcttta
ggtaagaaagtatgtgatgcaaaatatcctaaaaggaatactggaaaaatgtgtgataag
gccactacttctgatgggacaagttgctctttgaggtcaaagaaaagaaaagtagaatct
tttatcaataatattgaagaaattgagacaattcgaaaccaacagggtgaagatgcaagc
atttctaaggttgatggtaagaacaccttagataccaacaaaaaaagacagatacacaga
aaagaatttaaccctatattgaggttagacagcaataaaaaagtaagagagaaaaagatg
aaagtttccttccttggtatctcagaagatggagtgcagaatgaccatcaggagggtaag
aataacatttctgcaaaggaaactcaactccttgaaagggttactgatgtctttacaaat
aaagctcaatccaatgaagaggttcagatccgtcctggttcaggaattgttaatcattca
gtaatgctaaagaaacttgatcaagcaaatggagtggtgttgcaaagttgccaaaccctt
cctcaaaaagttcaatgtgctttctgtctttcttcagatgattcaaaggcctcgggagag
atggtccacttctgcaatggcaagcctgtagctgccagttatgaagggggattaaaggtc
atacactctcatagaagttgcgctgagtgggcacctaacgtttattttgagggtgatact
gcaattaatctcgaagctgagttaactagaagtaagagaataaggtgtggctgctgtgga
ctcaaaggtgctgctcttggatgttatgagaagagctgtcataagagtttccatgtcaca
tgtgcaaagatgactcctcaatgtcgatgggatactgaaaactttgttatgttatgccct
cttcatgcttcttctaaactgcctatagaagactccgcaactacaaagagaataagaaag
aaatgtgttccaaaaagacaaaaatccaatcagagcaatcaaaaacaagatgtcagtact
tgttcaagttggaattcaagtgagacggcttataagttggttatttgttgttctgctcta
accattgaggaaaagggaattgtttccgaatttcagagattatctggattgacagtgtta
aaaaattgggatacaagtgttacccatgtcattgcatcaacagatgaaaatggagcatgc
agaagaaccctcaagattttgatgggtattttggaggggaagtggatacttaatatcgag
tgggttaaggcttgtatgaaggccacaaagcctgttctagaggatccatttgaaattctc
gttgatattcatgggatgagggacggtccacaacttggaaggctaagaatcttgaacaag
caaccaaaaatatttgaggggttaaaattctactttattggagattttgtagcttcttac
aagggctatattcaagatcttatagttgctggtggaggaactattttgcatagaaaaccc
cttcctggagccgaagcagacagatcaccttctaccttcataatatacagcattgagcta
cctgataaatgtgataccaaaaacaaaggtatggttattttaaatcaaagacgggcagac
gctgaagctatggcaagtgcaactggagccaaagctgtaaacaattcttggattttgaac
tccattgcagcttgcagattacagaatttcacagaataa
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integrated database retrieval system
