Mercurialis annua (annual mercury): 126681662
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Entry
126681662 CDS
T10153
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03030
DNA replication
mean03420
Nucleotide excision repair
mean03430
Mismatch repair
mean03440
Homologous recombination
mean03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126681662
03420 Nucleotide excision repair
126681662
03430 Mismatch repair
126681662
03440 Homologous recombination
126681662
03460 Fanconi anemia pathway
126681662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mean03000
]
126681662
03032 DNA replication proteins [BR:
mean03032
]
126681662
03400 DNA repair and recombination proteins [BR:
mean03400
]
126681662
Transcription factors [BR:
mean03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126681662
DNA replication proteins [BR:
mean03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126681662
DNA repair and recombination proteins [BR:
mean03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126681662
MMR (mismatch excision repair)
126681662
DSBR (double strand breaks repair)
HR (homologous recombination)
126681662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
DUF223
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
126681662
NCBI-ProteinID:
XP_050233166
LinkDB
All DBs
Position
LG5:complement(19774243..19775634)
Genome browser
AA seq
463 aa
AA seq
DB search
MENNIDLLQPYQKEWSISVMVIRSGSIESYNNGSNKKRKIILVDIKGTKIQAILFNEAVE
KFKDCLERGKTYTITNGVVKAINSHYPNVNERIELSLTLYTTVIECAIIIPRDVLIFNFT
SFNDVEKISDEKTMVDILGIVEHVKSAFTVQTRMGIPTRKREILLLNDKLEKLNLILWGD
LADNEGGEVESLLQNSDQRPIIALSNVKAKIYAEELQLNTTQVTTIEINLDLLEVDELRE
SYYSNILVNKQVSFLSSPNKFTKVSEVTLKEIIENKYQEIQCYFEATILSVVNSNNPWYN
SCNKCSKKIYPNKGHLKCFNCNDENPQYTPRYMLKLLVSDSIEEAYVTIFDNAEILIGCP
VFKYMKLNMDGPKEDIQFYKKLMSCQSKQYRFLVMLKKDKEADYARKQMVASDVQEVEDN
NSARELRDKEKFKDNNQVIEIKDDVLEAEGDTRLKKKIKIEKD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataatattgatttgcttcaaccatatcaaaaagaatggtctattagcgttatg
gtaattcgaagcgggtcaatagaatcatataacaatggttctaacaaaaaaagaaaaatc
atattagttgatattaaaggaaccaaaatacaagctattttattcaatgaagcggtggaa
aagttcaaagattgtttagaaagaggcaagacttatacgatcactaatggagtggttaaa
gcaattaattcacattatcctaatgtgaatgaaagaattgaactgtctctgacactatat
accactgtcatcgaatgtgcgataattattccaagagatgttttaatatttaactttaca
tcgtttaatgatgtagaaaaaatttctgatgagaagactatggtagatatattgggcatt
gtagaacatgtcaaatctgctttcacggtgcaaacaagaatggggataccaactagaaaa
agagaaatacttcttcttaatgacaaattggaaaaactaaatttaattttatggggagat
ctagctgacaatgaaggtggtgaagtagaatctctccttcaaaattcggaccagaggcca
ataatagccttatccaatgtcaaagcaaaaatatatgccgaagaattacaactcaataca
actcaagttacaacaatagagataaacttagacttactagaagtggatgaactacgtgaa
tcgtattattccaatatattggtaaacaaacaagtaagttttctttcgtcgcctaataaa
tttacaaaggtttcagaagttacattgaaagaaataatagaaaataagtatcaagagatt
caatgttattttgaggcaactatattatcggttgtaaatagcaacaatccttggtataat
tcttgtaacaagtgcagcaaaaagatatatccaaacaaagggcatctaaaatgtttcaat
tgtaatgatgaaaatcctcaatatactccaaggtatatgctcaaactacttgtctcagat
tcaatcgaagaagcatatgtcaccatatttgataatgcagaaatcttgattggatgtccg
gtgtttaaatatatgaaattaaatatggacggaccaaaagaagatatacaattttacaag
aaattgatgtcttgccagtcaaaacaatatcgttttcttgtgatgttgaaaaaagataag
gaagctgattatgcaaggaagcaaatggttgcatcagatgtacaagaagttgaagacaat
aattcagcaagagaactcagagataaggaaaaatttaaagacaataatcaagttatagaa
ataaaagatgatgtccttgaagctgaaggagatacaagattaaagaagaaaatcaagatt
gagaaagattaa
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