Mercurialis annua (annual mercury): 126682210
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Entry
126682210 CDS
T10153
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03013
Nucleocytoplasmic transport
mean03015
mRNA surveillance pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126682210
09122 Translation
03013 Nucleocytoplasmic transport
126682210
03015 mRNA surveillance pathway
126682210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126682210
03041 Spliceosome [BR:
mean03041
]
126682210
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126682210
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126682210
Spliceosome [BR:
mean03041
]
Complex C
Other components
EJC/TREX
126682210
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126682210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
126682210
NCBI-ProteinID:
XP_050233764
LinkDB
All DBs
Position
LG5:8527770..8533557
Genome browser
AA seq
427 aa
AA seq
DB search
MGEVKDNDAYEEELLDYEEEDEKAPDSVTAKAADTAKKGYVGIHSSGFRDFLLKPELLRA
IIDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVL
CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILAL
ARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTEMEKNRKLNDLLDALDFNQVVIFVKSVSR
AAELNKLLVECNFPSICIHSGMTQEDRLMKYKSFKEGHKRILVATDLVGRGIDIERVNIV
INYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQARFEVDIKELPEQID
TSTYMPS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagttaaggataacgacgcttacgaggaggagcttctcgactatgaggaggaa
gacgaaaaagcacctgattccgtcactgctaaagccgctgatacagcgaaaaagggttac
gtcgggattcacagttcaggtttcagagacttcttgttaaagccagagcttctacgggcc
attatagattctggatttgaacatccttctgaagtacaacatgaatgcatccctcaagct
attctgggaatggatgttatctgccaagctaaatctggaatgggaaagactgctgttttt
gttctttccactctgcaacagattgagcctgttgctggtcaagttgctgcgcttgtgctg
tgccatacaagagaattggcatatcagatatgccatgagtttgagaggttcagtacttat
ttgcccgatataaaagttgctgtcttctatggtggtgtcaacatcaaggtgcacaaggaa
ttactaaaaaatgaatgcccacatattgttgttggaactcctggaagaatattggccctg
gcgagagataaagatcttggattgaagaatgtgaggcattttatactagatgagtgtgac
aagatgcttgaatcgcttgacatgaggagagatgtgcaggagatttttaagatgactcct
catgacaagcaagttatgatgttttcagctacactcagcaaggaaatacgccctgtttgc
aagaaatttatgcaagatcctatggaaatttatgtagatgatgaggccaagttgactctt
cacggccttgtacagcactacattaaattgactgaaatggagaaaaatagaaagttgaat
gacctgcttgatgctctggatttcaaccaagttgtcatctttgtcaagagtgtgagcaga
gctgctgaactgaataagttgttggtggagtgcaacttcccttccatatgcattcactct
ggaatgactcaggaagacaggttgatgaagtataagagttttaaggagggtcacaagcga
atacttgtggccactgatttggttggaagaggcattgatattgaacgtgttaacattgtt
atcaactatgacatgccagattctgctgattcatatttgcacagggtggggagggctggt
aggtttggcaccaagggccttgcaattacatttgtctcatctgcatcagactccgatgtt
ctgaatcaagttcaagcaaggtttgaggtagatataaaggagctccctgaacagattgat
acttccacatacatgccatcatga
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