Mercurialis annua (annual mercury): 126682359
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Entry
126682359 CDS
T10153
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E
KO
K07466
replication factor A1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03030
DNA replication
mean03420
Nucleotide excision repair
mean03430
Mismatch repair
mean03440
Homologous recombination
mean03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126682359
03420 Nucleotide excision repair
126682359
03430 Mismatch repair
126682359
03440 Homologous recombination
126682359
03460 Fanconi anemia pathway
126682359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mean03000
]
126682359
03032 DNA replication proteins [BR:
mean03032
]
126682359
03400 DNA repair and recombination proteins [BR:
mean03400
]
126682359
Transcription factors [BR:
mean03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126682359
DNA replication proteins [BR:
mean03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126682359
DNA repair and recombination proteins [BR:
mean03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126682359
MMR (mismatch excision repair)
126682359
DSBR (double strand breaks repair)
HR (homologous recombination)
126682359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
DUF223
BRCA-2_OB1
DUF7008
Peptidase_S49
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
126682359
NCBI-ProteinID:
XP_050233968
LinkDB
All DBs
Position
LG5:42339629..42343716
Genome browser
AA seq
847 aa
AA seq
DB search
MNLSEGAIAKITNGGASSAELKPTLQVTDLKQVQTKQPQQNDRFRLILSDGSQSQQAMLG
TQINHLVKDGNLRPGSIVQLIQYTCTTVQGRMIIIILELVVVAVECAIIRNPGNSLGPSQ
TSTDQPLRNTANPQSFGSGSPARGMVENPNVNGSSFQNARMNQLHGSPHANNYDSGRYGA
ANAPPSHLKAELGSGLPGSASINRSYSDQSAGFRNPRPEIPQTASTYSYSPRPAYQQPPP
MYSNRGPVAKNGAPPRLMPISALNPYQGKWTIKARVTAKGELRHYNNSRGDGKLFSFDLL
DSDGGEIRVTCFNAVVDQFYNHIEAGKIYLISNGSLKPAQKTFNHLHNDLEIYLDSNSVV
QPCFEDDNSIPRQQFHFRSITEIEATDNNSVVDVIGVVSSITPVASLMRKNGIETQKRSL
QLKDKSGRSVELTLWGNFCNAEGQRLQSMCDSGGFPVLAVKSARVSEFNGKTVGTISSSQ
LVIEPDFAEAQALKEWFEKEGKNTPSVSISREWSSVGRSDVHKTISQIKEEKLGTSEKPD
WITLNATVIFVKADNFCYTACPIMAGDRPCSKKVTNNGDGKWRCEKCDQTMDECDYRYIL
QFQIQDHTGLTWVTAFQECGEEIMGISAKDLHLMKYENQDDESFSKVLRQVLFSRFVLKL
KVKEETFSDEQRVKSTVIRAEKVSHSSQSRFFLEMMEKLKSGNSTPFASAAEPTYPNSVA
STGIESLGDRSGGPLGSNQVVNNREFANQAGQYGNQFAAAYSTPSVSCVSCGSTSHSSAN
CISAMNSSRQAAGANRPSSFGGSGGAGGECFKCHQVGHWARDCPGINTVPQAYGSTGISS
GRYGGMR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgagtgaaggggcaatagcgaagataacaaacggaggagcatcgtcggcagaa
ctgaagccaacgctgcaagtgacggacctgaaacaagtgcagaccaaacagccgcagcaa
aatgaccggtttcggctgattttatcagatgggtctcagtcgcaacaagcaatgctgggt
acccagattaaccatttggttaaagatggaaacttgaggcctggttctattgttcagttg
attcagtatacttgtaccactgttcaaggccgcatgattattattattttggaattggtt
gtggtagctgttgagtgtgctatcattcgcaacccaggaaattctttggggccttcacaa
acctcgactgatcaaccacttagaaacacagcaaatcctcaatcatttggtagcggttca
ccagccagagggatggttgaaaacccaaatgtgaatggatcgtcttttcaaaacgctaga
atgaatcagttacatggcagtcctcatgccaacaattatgattcaggaagatatggtgca
gcaaatgcacctccatctcacctgaaagcagaacttggctctgggctccctggatcagct
tcaataaacaggtcatacagtgatcagagtgcaggctttcgcaatcctagaccagaaatt
ccacagactgccagtacttattcttattcccctcggccagcatatcaacaaccaccccca
atgtattctaatagaggaccagtggctaaaaatggagctcccccaaggttaatgccaatt
tctgccctcaatccttaccagggcaagtggacaattaaggcaagagtcacagcaaaggga
gaactgaggcactacaataatagtcgcggtgatgggaagttgttttcttttgatcttctt
gattctgacggtggagaaattagagttacctgctttaatgctgtggttgaccaattttac
aaccatatagaagcaggtaaaatttatttaatttccaacggaagtttgaaacctgctcag
aagactttcaaccatcttcacaatgatctagaaatctatctggatagcaactcggtcgtt
caaccttgttttgaggacgacaactcaattccaaggcaacaatttcatttccgaagcatt
actgaaattgaggccacggataataacagtgttgtggatgtaattggtgtggtatcttct
attactcctgtggcttcattaatgaggaaaaatggtattgaaactcagaagagatccctc
cagttgaaagacaagtcaggtcgtagtgttgaattaacactgtggggaaatttttgcaac
gcagaagggcaaaggttgcagagtatgtgtgattctggtggatttcctgttctagctgtt
aaatcggctagagtcagcgagttcaacgggaagacagttgggactatttcttcaagtcag
ttagtaatagagcctgatttcgcagaggctcaagcgctgaaggaatggtttgaaaaggaa
gggaagaacactccttctgtctcgatctcaagagaatggtcgagtgtgggtaggtcagat
gttcacaaaactatttcacaaattaaggaggagaagctagggacttccgagaaaccagat
tggatcactcttaatgcaacagtgatttttgtaaaggctgacaatttctgctatacagct
tgccccatcatggctggggatcgaccttgcagcaagaaagttacaaataatggagatggg
aaatggcggtgtgagaagtgtgatcagactatggatgaatgcgattacagatacatactt
cagttccaaatacaggatcatactggtcttacatgggtcactgcatttcaagaatgtggt
gaggagattatgggcatatctgcaaaagatctgcaccttatgaaatatgagaatcaagat
gatgagagtttctctaaagttcttcgtcaagttttgtttagtagatttgttctcaagttg
aaagtaaaggaggagactttcagtgacgaacagcgtgtaaagtccactgttatcagagct
gaaaaggtgagccattcatcccaatctaggtttttccttgagatgatggaaaagcttaaa
tcaggaaactccacaccttttgcatcggctgctgaacctacctatcctaactctgttgca
agcactggaattgaaagtctcggagacagatcaggtggaccgctaggatctaatcaagtg
gtgaacaacagagaatttgcaaatcaagcgggtcagtatggtaaccagtttgccgctgca
tactctactcctagtgtttcttgtgtcagctgtggctctactagtcatagctctgcaaat
tgcatcagtgccatgaactcttcaaggcaggcagcgggtgccaacagaccatcgtctttt
ggtggcagtggtggcgctggaggtgaatgcttcaaatgccatcaagttgggcattgggcg
agggactgccccggtataaacactgttcctcaagcttatggtagcaccgggatttcttct
gggagatatggaggtatgaggtaa
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