Mercurialis annua (annual mercury): 126685671
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Entry
126685671 CDS
T10153
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126685671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126685671
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126685671
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126685671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
126685671
NCBI-ProteinID:
XP_050235543
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All DBs
Position
LG6:complement(41344911..41347828)
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AA seq
323 aa
AA seq
DB search
MREIKLSLTPSQKIRLQRALQQLESFYSNKSYSDASVTVADTIPISLEDGNILKGHGTSE
RDGEVVATICGVVERVNMLVYVRSLRARYKPEIGDIIVGRVIEVAQKRWKLEINYNQDAV
LMLSSMNLPDGIQRRRTALDELNMRNVFEEKDVVCAEVRNFQHDGGLQLQARSQKYGKLE
KGQLLTVSPYLVKRQKQHFHYLEQYNVDLIVGCNGFIWVGEHVDIRDIMIEDQVNNTEHQ
NIESSKASEDVPIETRRNICCIANAVRVLSTLGFCLTLDVILETINLSSAKNIGIDEMLG
SEFHVLVAEKEAERRSSSVKKKR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaataaagctatcactgactccatcgcaaaaaattagactacagagagctctt
caacaactcgaatcgttttattcgaataagtcttattccgatgcttccgtcaccgtcgcc
gatacaatcccgatcagcctcgaagacggcaacattctcaagggacatggaacttcggag
cgcgacggtgaagtggtggcgacaatttgtggagttgttgagcgagttaatatgctagtt
tatgtacgctctttacgcgccaggtacaaacctgagattggagatattatcgtggggcga
gttattgaggttgcacaaaaacgttggaaattggaaataaactacaatcaagatgctgtt
ttaatgctttcttcgatgaatttgcctgatggtattcagaggcggcgaactgcactggat
gaactcaacatgcgtaatgtttttgaggagaaagatgttgtttgtgctgaagttcgtaat
tttcagcatgatggcggtttacaactgcaagcgagaagtcagaagtatgggaagctggag
aagggtcaattgctgacagtctctccttatctggtaaaaagacaaaagcagcatttccat
tatctggagcaatataatgttgacttgatagttggatgtaacggatttatatgggtagga
gaacatgtcgatatcagagacattatgatcgaggaccaagtaaacaataccgaacaccaa
aatattgaatcgagtaaggcatctgaagacgtgccaattgagacaagacggaacatatgc
tgcattgctaatgctgtccgtgtattgtcaactttaggcttctgcttgacattggatgtg
attttggagacgatcaacttgagtagcgcaaagaatattggcatagatgaaatgcttggg
tcagagtttcatgttttggtagcagagaaagaggctgaacgtcggagttcatcagtaaaa
aagaaaagataa
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