Mercurialis annua (annual mercury): 126686123
Help
Entry
126686123 CDS
T10153
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7
KO
K14409
protein SMG7
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126686123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126686123
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126686123
mRNA cycle factors
Common to processing body (P body) and stress granule
126686123
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
126686123
NCBI-ProteinID:
XP_050236111
LinkDB
All DBs
Position
LG6:3012303..3019192
Genome browser
AA seq
985 aa
AA seq
DB search
MMIVQMDKMSAPSSRERAQRLYEKNVELENKRRRSAQARIPSDPNAWQQMRENYEAIILE
DYGFCEQHNIEYALWQLHYRRIEELRAHYSAAIASANSNTSQGAKVPSRPDRVTKIRLQF
KTFLSEASGFYHDLILKIRDKYGLPLGYFSDDSDNRVVLEKDGKKSADMKKGLVSCHRCL
IYLGDLARYKGLYGEGDSKTREYGAASSYYLQAASLWSSSGNPHHQLAILASYSGDELAA
VYRYFRSLAVENPFTTARDNLIVAFEKNRQSYTQLLGDAKVSTGKDASVRLTSKGRGKRE
AKPAAKDTNLEVNVDIEKTPSINEVYKSFCTRFVRLNGILFTRTSLETFAEVLSCVSNEF
CELLSCGPEEELNFGPDIVENAIFVVRLICILIFTVHNVKKEAEGQTYAEIVQRAVLLQN
AFTAVFELMGHLLKRLVLLRDPSSSYLLPGILVFVEWLACCPDVASGSDADEKQTAVRLN
FWKHCISFLNKILSFWSMSLDDNEEDTCFYNMSHYEEGETGNRLALWEDFELRGFLPILP
AHSILDFSRKHTFGGDGSKEKIARVKRILAAGKALANIAKIDQKKVFYDSRMKKFVIGIE
SPISDDDMLTFGSALPKSNDLVQVVQPEQIINVGVPQPSPQSFMEGDEEDEVIVFRPAVT
ENRSDMIGPKWGPHDGMKPSQDMSAGAMKFYGGSISAPLDMRQQAAFDAGPQISVSNGII
TSQNVQPVQPHTSKWLMEESVSLANSLKAVRFMENGISEHEFQKDLGIAHLPGRSVPAQQ
PANVNASGMFYNQARMLEAVVPSKVDAITSGVFAESLAMKTSAGLPVGARKSPVSRPIRH
LGPPPGFSHVPAKQSNDLALGSDFMSENSLADDYSWLDGYQLPYAAKGYGLNAAANLTSQ
AMPQYINNNNGSMGTVSFPFPGKQVPSVQIQSENQNGWQNYQSLEHLRAQQEQQLQQQLL
NGNQQFTPMPEQYQGKSIWSNRYIV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgtacagatggataaaatgtctgctccttcatctagggagcgcgctcagcgt
ctttatgaaaagaatgtcgagttggagaataagcgtcggaggtcagctcaggcaagaatt
ccatctgatcctaatgcatggcagcagatgcgggagaactatgaagctataattcttgaa
gattatggtttttgtgagcaacacaacatagaatatgctctttggcagttgcattataga
cgcattgaggaattaagagcccactacagtgctgctatagcatctgctaactcgaataca
tcacagggtgcaaaagttccttctcgacctgaccgagttacaaaaattaggctgcagttt
aaaacatttctttcagaagccagtgggttttatcatgacctgatcctgaaaatcagagat
aaatatgggcttcctctggggtacttttctgacgattcagataatcgagttgtcttggag
aaagatggaaaaaaatcagctgacatgaagaaagggttggtctcttgtcaccgttgtttg
atatacttgggtgatttggcaaggtacaagggactttatggggagggtgactctaaaaca
cgtgagtatggggcagcttcaagctactacttgcaagctgcatctctttggtcatcaagt
gggaaccctcatcatcagcttgctattttggcttcctattctggagatgaattggcggca
gtgtaccgttattttaggagtctggcagttgaaaatccattcacaacagcaagagacaac
ttgattgttgctttcgagaagaaccgtcaaagctacactcaactgctcggagatgctaaa
gtttcgacaggcaaggatgcatctgtgcggttgaccagcaagggaagagggaaaagggaa
gcaaaacctgctgctaaagacaccaacttagaagtcaatgttgacattgagaagacacct
agcatcaatgaggtgtacaagtccttttgcactcgctttgtccgcctgaatggcattctg
tttacacgcaccagcctggagacatttgctgaagttctttcatgcgttagcaatgaattc
tgcgagcttctttcttgcgggcccgaagaagaattaaattttggccccgatattgttgaa
aatgccatcttcgttgtgcggcttatctgtattctcattttcactgttcacaatgtcaaa
aaagaagctgaaggtcaaacatatgcggagattgtacagcgtgctgttcttcttcagaat
gcatttactgcagtttttgagttgatgggacacctgctaaagaggttggtgctgctgcgt
gatccttcttccagttatctcttacctgggattctggtttttgtggagtggttagcctgc
tgtcctgatgttgcatcagggagtgatgcagatgagaagcagactgctgttagattaaac
ttttggaagcattgtatatctttcttgaacaaaatactgtcattttggtcaatgtccctt
gatgataatgaagaggacacatgcttctacaacatgagccattatgaagaaggggaaact
ggaaatcggcttgctctatgggaggattttgaattgagagggtttttaccaattctgcct
gcacatagcattttggatttttcaaggaagcacacttttggaggtgatggaagcaaagaa
aaaatagcgcgtgttaaaaggattctagcagctggaaaggctctagcaaatattgctaag
attgatcaaaaaaaagtcttttatgattcaaggatgaagaaattcgtcataggcatagag
tcgccaatttcagatgatgacatgttgacttttggttctgctttaccaaaaagtaatgac
ctggtgcaagtagttcagcctgagcaaataattaatgtgggtgttccgcagcctagtcca
caatcattcatggaaggggacgaggaggatgaagtaattgttttcaggcctgctgtgacg
gaaaatcgaagcgatatgattggccccaaatggggtcctcacgatggcatgaaaccgagt
caagatatgtctgctggtgctatgaaattttatggtggttctatttcagctcctcttgat
atgcgtcagcaagctgcatttgatgcaggtcctcaaatatctgtatccaatggcatcatc
acttcccagaatgtgcaaccagttcaaccacacacctcgaagtggttgatggaagaatct
gtttcgcttgcaaatagtttgaaagctgtcaggttcatggaaaatggtatatcagaacat
gagtttcaaaaagacttgggcattgcccatcttcctggacgttcagtaccagctcaacaa
cctgcaaatgtcaatgctagtggtatgttttataatcaggcaagaatgctggaagctgta
gtcccatcgaaggttgatgctattacatccggagtttttgctgaaagtcttgctatgaag
acctcagcaggtttgccagtaggtgcaaggaaaagtccagttagccggcctataaggcat
cttgggcctcccccaggttttagtcatgttcctgccaaacaatctaatgatcttgcactg
ggttcagattttatgagtgagaattcgctagctgatgattatagctggttagatggatat
cagttgccatatgcggcaaaaggttatggactcaatgctgctgctaatctcacttctcaa
gctatgcctcagtacatcaataacaataatggctcaatggggacagttagctttcctttt
cctggaaagcaggtgccatcagtgcaaatccagtcagaaaatcagaatggttggcagaat
taccagtcccttgagcatctaagagcacagcaagagcagcagctgcagcaacaactttta
aatggaaatcagcaatttactccaatgcctgagcaatatcagggaaagtccatctggagt
aatcgttacattgtgtga
DBGET
integrated database retrieval system
