Mercurialis annua (annual mercury): 130014568
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Entry
130014568 CDS
T10153
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130014568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mean03041
]
130014568
Enzymes [BR:
mean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130014568
Spliceosome [BR:
mean03041
]
Complex A
U2 snRNP components
U2 related factors
130014568
Complex B
130014568
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Asp_DH_C
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
130014568
NCBI-ProteinID:
XP_050209898
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All DBs
Position
LG8:complement(37875022..37880348)
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AA seq
933 aa
AA seq
DB search
MEAAVLVERKKEKEKLRDRRCLGDERERSKGRKREREDTVEKGDEDLGKKGRERERRREM
EKREREQEKENHRELRSDDNGEDDSRENDKKRHKRDEDDYRERTCVQSSKEKKTREDDSA
NKEKKTREELEDKQKKLDEEMEKRRRRVQEWQELKRKKEESEKEKHGEVLNNDEPQAGKT
WTLEGDSDDEEAGTSISPNDAMEDDDIIDSLDAYIKSILPEVEKLSNGMKLKKGSEKSLG
RIIAGEDSDSESDNGNTENSESNLVEKDDDEVIKRVKKTKLEKLSVVDHSKIDYRPFRKN
FYKEMKAISRMTSEEVATYRKELELKVHGKDVPNPVKTWNQLGLITKILKTIKKLNYEKP
MAVQTQALPIIMSGRDCIGIAKTGSGKTLAFVIPMLRHIVNQPPVEDGDGPIGLIMAPTR
ELVQQIHSDIRKFSKALGIRCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSGG
KITNLRRVSYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVL
NKPVEFQVGGRSVVNKDITQLVELRPETERFSRLLELLKEWSVKGKILIFAQTQEKCNLL
HRDLLKHGFKCLLFHGARDQMDRESAISNFKMNVCNVMTATSIAARGLDVKELELVINFD
VPNHYEDYVHRVGRTGRAGRKGCAITFISEDDARYAPDLVKALQLSEQVVPQDLKALADG
FMAKVNQGLEQAHGTGYGGSGFKFNEEEDEKMIAARRAQLKEYGYDEEKPDSEDEDDSLV
RETGGGDVSQHNNNALASSASIATPTINITPGAVAKAVAASINLHHNIAKILADAMPERY
EAELEINNFPQNARWKVTRKETLGPISEWTGASITTRGQFFPPGHIPASGDRKLYLFIEG
PSETSVKRAKTELKCVLEDIANQALSLPGKYSL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgcggttctggtagagagaaagaaggagaaagagaagctaagggatagaagg
tgcttgggcgatgaaagagaaaggagtaagggcaggaagagagaacgggaagatacggtg
gagaaaggagacgaagatttggggaagaaggggcgtgagagggagagacgtagggagatg
gagaaaagagaacgtgagcaggagaaggagaaccatagagagcttagaagcgatgataat
ggtgaagatgattctagggagaatgacaaaaaacgtcataagagagatgaggacgactac
agggagagaacttgtgtgcagagcagtaaagagaagaaaacccgagaggatgactctgct
aacaaagagaagaaaacccgagaggaattggaggataaacagaaaaaattggatgaagaa
atggagaagaggagaagacgagtacaggagtggcaagagctgaagagaaaaaaagaagaa
tctgagaaagaaaaacatggggaagtattaaataatgatgaaccacaggcaggtaaaact
tggactctcgaaggagattctgatgatgaagaagctggaacttcaattagtcctaatgat
gctatggaggatgacgatattattgattcattagatgcttacataaagtccatcttacca
gaagtcgagaagctaagtaatggaatgaagctgaagaaaggctctgagaaatcactgggg
agaataattgctggtgaggattctgattcagagtcagataatggtaacactgaaaatagt
gaaagcaacttagttgagaaagatgatgatgaagtcataaagagggtcaagaaaacaaaa
cttgaaaagttgtctgttgttgatcactcaaagattgattatagaccatttcgtaaaaat
ttctataaagaaatgaaggcgatatcaaggatgacttctgaagaggttgctacttataga
aaagagttagagttgaaagtacatggcaaagatgttccaaatccagttaaaacatggaac
caacttggattgataactaagattttgaagacaattaagaaacttaattatgagaagcct
atggcagttcaaactcaggcactgccaattataatgagtgggagagactgcatagggatt
gcaaagactggctctggcaaaaccctcgcttttgtgattccaatgctgaggcatatcgtt
aaccagccacctgtggaagatggagatgggccgattggacttataatggcaccaaccaga
gagcttgttcaacagatacatagtgacataaggaagttttccaaggcgctgggaattaga
tgtgtaccagtgtatggaggttctggtgttgctcaacagatcagcgatttaaagcgggga
actgagattgttgtctgtaccccaggtaggatgatagacatactttgcactagtgggggc
aaaattacaaatcttcgaagagtgtcatatcttgttatggacgaagctgatcgcatgttt
gatatgggttttgaacctcaaatcaccagaattgtacaaaatattcgaccggatcgtcaa
actgtactcttttctgcaactttccctcggcaggttgagattttagctcgtaaagtattg
aacaagcctgtggaattccaggttggtgggaggagcgttgtgaacaaggacattacccag
ttggttgagttaaggccagaaactgagaggttctcgagactgttagagctacttaaagag
tggtctgtgaagggtaagattttgatattcgctcagacacaggagaaatgcaatttgcta
catagggatttgttaaagcatggctttaaatgccttctttttcatggtgctagggatcaa
atggatcgcgagtcagcaatttccaactttaagatgaacgtctgcaatgtgatgactgcc
acgagtattgctgcccgaggtttggatgtgaaggagcttgaactggtgattaactttgat
gttccaaaccactacgaggattatgttcatcgtgttggtcgaactgggcgagctggtcgc
aaaggttgtgcaatcacttttatttctgaggacgatgccagatatgcgccagatcttgta
aaagcattacaactctctgagcaagttgttccgcaagacctgaaagctcttgctgatggt
tttatggcaaaagttaatcagggacttgagcaagcccatggaaccggttatggcggaagt
ggttttaaattcaatgaagaggaggatgaaaagatgatagcagcaaggagagcacaacta
aaggaatatggctatgacgaagagaagcccgattcagaagatgaagatgacagtttggtc
cgtgagacaggtggtggtgatgtttcacagcataataataatgcccttgcttcctctgct
tccatagcaacaccaacaattaatatcacacctggagctgtagctaaggcagttgctgct
tccatcaacttacatcataacattgcaaagattcttgctgatgccatgcctgaacgttat
gaagcagagctcgagattaataatttcccacaaaatgctcggtggaaggttacccgcaag
gaaacattgggtccgatttctgaatggactggtgcttccatcactaccaggggacagttc
ttcccgccaggtcatattccagcttctggggatcgcaagctgtacttgttcatcgagggt
cctagtgaaacatctgttaagagggctaaaacagagcttaaatgtgttttggaagacatc
gcgaaccaggcattatcacttcctggaaaatactccctataa
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