Methylacidimicrobium sp. AP8: MTHMO_0194
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Entry
MTHMO_0194 CDS
T06915
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
meap
Methylacidimicrobium sp. AP8
Brite
KEGG Orthology (KO) [BR:
meap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meap03016
]
MTHMO_0194 (truB)
Enzymes [BR:
meap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MTHMO_0194 (truB)
Transfer RNA biogenesis [BR:
meap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MTHMO_0194 (truB)
Prokaryotic type
MTHMO_0194 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CAB4242540
LinkDB
All DBs
Position
I:complement(197987..198700)
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AA seq
237 aa
AA seq
DB search
MDIDGVLLLDKPKGCTSHDMVDFLRRRFGLRKVGHCGTLDPLATGLLVLVLGKATRIQDL
LMAEDKTYRGTMRLGQITDTQDADGRILEERPVPSYSLDQLEAVFAKFSGEFLQVPPMVS
AIKHHGKPLYKLAREGKVIERPPRAVEVYSYRILEWKPPMLGFEISCRKGFYVRTYCHDI
GLALGCGAHLAELRRLQSGNFSVERALSFASLQQMHRAEELLPHVLSLPEVSRIRRQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgacggcgttcttcttttagacaagcccaagggatgcacgtcccatgacatg
gtcgatttcctccggcgtcgcttcgggctgcggaaggtcggccactgcggcaccctcgat
cctctggcaaccgggttgctcgtcctggttctcggcaaggcgacgcgcattcaggacctg
ctaatggccgaagacaagacgtatcgcgggacgatgcgcctcggccaaatcaccgacacc
caagatgccgacggccggatcctcgaagagcgtccggtcccctcgtactccctcgatcag
ctggaggcggtcttcgccaagttctccggagaatttctccaggtgcctcccatggtctcc
gcgatcaagcatcatgggaagcctctctataagctggcgcgagaaggcaaggttatcgaa
cggccgccgcgcgccgtcgaggtctactcctatcgcatcctcgaatggaagcccccgatg
ctcggcttcgagatctcttgccgcaagggcttctacgtgaggacctattgtcacgacatc
ggtctggccctcggatgcggagcccatctggccgagctacgccgcctgcagtccggaaac
ttctcggtcgagcgagcgctttctttcgcgtcgctgcagcaaatgcatcgagcggaggag
ctcctgcctcatgtgttgtccctacccgaagtttcgcgcattcgacggcagtag
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