KEGG   Methylacidimicrobium sp. AP8: MTHMO_0436
Entry
MTHMO_0436        CDS       T06915                                 
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3 (fragment)
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
meap  Methylacidimicrobium sp. AP8
Brite
KEGG Orthology (KO) [BR:meap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:meap02048]
    MTHMO_0436
Enzymes [BR:meap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MTHMO_0436
Prokaryotic defense system [BR:meap02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    MTHMO_0436
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD HELP ResIII Helicase_C
Other DBs
NCBI-ProteinID: CAB4242782
LinkDB
Position
I:434975..436738
AA seq 587 aa
MIVASPDDFAAFFEEVHGYRPFPWQTRLQRLVAESGRWPRVLDLPTGSGKTAAIDIAIYH
LSLEADRGKGRRAPVCIAFVVDRRLVVDDAFLRAQKLQKALAAPQGPVTARVAQRLKTLS
GEGPPLIARRLRGGIPREDNWARTPSQPTILCSTVDQIGSPLLFRGYGVSDSMKPVHAGL
IGSDCLILLDEAHLAEPFRQTLEWVHGYRGKNWREAEYAAPWGVALLTATAGQTPQEVFP
LEDEDRVHPVLGRRLNVSKPARLVEAAKGTAKGEEAASPAGDEAEEGDSDLGRRIAAILK
EVHASIDRFRGAPPPAIGVVVNRVVRAREVFRQLREEIGAEEADCLLLIGPSRPVDRDNV
ADQLASIRTGAERTLQKPLVVVATQCIEAGVDIDLDALITEAAPLDALRQRFGRLNRAGR
DIRPYAVILAAKSDLSARTDDPVYGKAIRQAWDCLQEAAAANGSDPIVEFGLRDFAVRME
KDALSRKDDAPVLLPAHLDLLSQTSPIPAADPEVALYLHGTSRQPDAITILWRGDIDPKN
QNDEQVRRLLLLVPPRSAEAIALPLWAVRRWLEERGQALAHVWGKVL
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgatcgtggcatcgccggacgattttgcggccttctttgaagaggttcacggctaccgg
cctttcccttggcaaacgcgcctccagcgtctggtggccgaaagcggccgatggccgagg
gtactcgatttgccgaccggctcgggcaagacggcggcgatcgatatcgccatctatcat
ctttcgctcgaagcggatcgcgggaaggggcggcgtgctcccgtctgcatcgccttcgtg
gtggaccggaggctggtggtggacgacgccttcctacgcgcgcagaagctgcaaaaagca
ctcgccgctccgcaaggtcccgtcaccgcgcgcgtggcgcaacgcctgaaaaccctctcc
ggtgagggcccgcctctgatcgcacgccgcctgcgcggcggcatcccgcgcgaggacaat
tgggcgcgtaccccttcccaaccgacgatactctgctcgaccgtcgaccagatcggctcg
cccctgctctttcgcggctatggggtttccgattccatgaagccggttcatgccggcctc
atcgggtcggactgtctgatcctgctcgatgaggcgcatctggccgagccctttcggcaa
acgctggaatgggtgcacggatatcgggggaaaaactggcgggaggcggaatacgccgca
ccctggggagtcgcccttcttaccgcaacggccggccagacaccgcaagaggtcttcccg
cttgaggatgaggacagggtgcacccggttttggggaggcgtttgaatgtttccaagcct
gcgcgtcttgtggaagcggcaaagggaacagcaaagggggaagaagctgctagccccgcg
ggtgacgaggcggaagaaggcgacagtgaccttggccgccgcatcgcggccatcctcaaa
gaagttcatgcctccatcgatcgcttccgcggcgctcctccccccgccatcggcgtggtg
gtcaatcgcgtcgtccgtgcgcgggaggtctttcggcaattgcgggaagagattggcgcg
gaagaagcggattgcctcctgttgatcggtccgagccgtccggtggatcgggacaacgtt
gccgatcagcttgcgtcgatccggaccggcgccgaacgcacgctccaaaagccgcttgtc
gtcgttgctacgcaatgcatcgaagcgggcgtggatattgatctcgatgcgctcatcacc
gaagccgccccgttggacgcactacgccagcgcttcggccgtctcaaccgtgcgggaaga
gatatccggccgtatgccgtcatccttgccgcgaaatccgatctttccgcgcgaaccgac
gatccggtctacggcaaggcgatccggcaggcatgggattgcctacaggaggcggcggct
gcgaacggcagcgatccgatcgtggagttcggtctgcgcgatttcgctgtccgcatggaa
aaggacgccctttctaggaaagacgacgcgcctgttctcctgcccgcccaccttgacctg
ttgagccagacatcgcccatcccggcggccgatccggaggttgccctctacctccatgga
acatcccgccagccggacgcgatcaccatcctttggcgcggcgacatcgatccgaagaac
cagaacgacgagcaggtccgccgccttctgctgctcgttccgccccgctcagccgaagcg
attgccttgccgctctgggcggtgcgccgttggttggaggaacgcgggcaagccctggcc
catgtttgggggaaggtcttgtaa

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